Trasforma i dati di input e traccia un modello con una pipeline TFX.
Visualizza su TensorFlow.org
Esegui in Google Colab
Visualizza l'origine su GitHub
Scarica taccuinoIn questo tutorial basato su notebook, creeremo ed eseguiremo una pipeline TFX per acquisire dati di input non elaborati e preelaborarli in modo appropriato per l'addestramento ML. Questo notebook è basato sul gasdotto TFX abbiamo costruito nella validazione dei dati utilizzando TFX Pipeline e tensorflow Data Validation Tutorial . Se non l'hai ancora letto, dovresti leggerlo prima di procedere con questo quaderno.
Puoi aumentare la qualità predittiva dei tuoi dati e/o ridurre la dimensionalità con l'ingegneria delle funzionalità. Uno dei vantaggi dell'utilizzo di TFX è che si scriverà il codice di trasformazione una volta e le trasformazioni risultanti saranno coerenti tra l'addestramento e l'elaborazione per evitare lo squilibrio tra addestramento e pubblicazione.
Noi aggiungeremo un Transform componente alla pipeline. Il componente Transform è implementato utilizzando il tf.transform biblioteca.
Si prega di consultare Capire TFX Pipelines per conoscere meglio i vari concetti in TFX.
Impostare
Per prima cosa dobbiamo installare il pacchetto TFX Python e scaricare il set di dati che utilizzeremo per il nostro modello.
Aggiorna Pip
Per evitare di aggiornare Pip in un sistema durante l'esecuzione in locale, verificare che stiamo eseguendo in Colab. I sistemi locali possono ovviamente essere aggiornati separatamente.
try:
import colab
!pip install --upgrade pip
except:
pass
Installa TFX
pip install -U tfx
Hai riavviato il runtime?
Se stai utilizzando Google Colab, la prima volta che esegui la cella in alto, devi riavviare il runtime facendo clic sul pulsante "RIAVVIA RUNTIME" sopra o utilizzando il menu "Runtime > Riavvia runtime ...". Ciò è dovuto al modo in cui Colab carica i pacchetti.
Controlla le versioni TensorFlow e TFX.
import tensorflow as tf
print('TensorFlow version: {}'.format(tf.__version__))
from tfx import v1 as tfx
print('TFX version: {}'.format(tfx.__version__))
TensorFlow version: 2.6.2 TFX version: 1.4.0
Imposta variabili
Ci sono alcune variabili usate per definire una pipeline. Puoi personalizzare queste variabili come desideri. Per impostazione predefinita, tutto l'output dalla pipeline verrà generato nella directory corrente.
import os
PIPELINE_NAME = "penguin-transform"
# Output directory to store artifacts generated from the pipeline.
PIPELINE_ROOT = os.path.join('pipelines', PIPELINE_NAME)
# Path to a SQLite DB file to use as an MLMD storage.
METADATA_PATH = os.path.join('metadata', PIPELINE_NAME, 'metadata.db')
# Output directory where created models from the pipeline will be exported.
SERVING_MODEL_DIR = os.path.join('serving_model', PIPELINE_NAME)
from absl import logging
logging.set_verbosity(logging.INFO) # Set default logging level.
Prepara dati di esempio
Scaricheremo il set di dati di esempio da utilizzare nella nostra pipeline TFX. Il set di dati che stiamo usando è Palmer Penguins set di dati .
Tuttavia, a differenza tutorial precedenti che hanno usato un set di dati già pre-elaborato, useremo il grezzo dataset Palmer Penguins.
Poiché il componente TFX ExampleGen legge gli input da una directory, è necessario creare una directory e copiarvi il set di dati.
import urllib.request
import tempfile
DATA_ROOT = tempfile.mkdtemp(prefix='tfx-data') # Create a temporary directory.
_data_path = 'https://storage.googleapis.com/download.tensorflow.org/data/palmer_penguins/penguins_size.csv'
_data_filepath = os.path.join(DATA_ROOT, "data.csv")
urllib.request.urlretrieve(_data_path, _data_filepath)
('/tmp/tfx-dataacmxfq9f/data.csv', <http.client.HTTPMessage at 0x7f5b0ab1bf10>)
Dai una rapida occhiata a come appaiono i dati grezzi.
head {_data_filepath}
species,island,culmen_length_mm,culmen_depth_mm,flipper_length_mm,body_mass_g,sex Adelie,Torgersen,39.1,18.7,181,3750,MALE Adelie,Torgersen,39.5,17.4,186,3800,FEMALE Adelie,Torgersen,40.3,18,195,3250,FEMALE Adelie,Torgersen,NA,NA,NA,NA,NA Adelie,Torgersen,36.7,19.3,193,3450,FEMALE Adelie,Torgersen,39.3,20.6,190,3650,MALE Adelie,Torgersen,38.9,17.8,181,3625,FEMALE Adelie,Torgersen,39.2,19.6,195,4675,MALE Adelie,Torgersen,34.1,18.1,193,3475,NA
Vi sono alcune voci con valori che sono rappresentati come mancanti NA . Elimineremo semplicemente quelle voci in questo tutorial.
sed -i '/\bNA\b/d' {_data_filepath}head {_data_filepath}
species,island,culmen_length_mm,culmen_depth_mm,flipper_length_mm,body_mass_g,sex Adelie,Torgersen,39.1,18.7,181,3750,MALE Adelie,Torgersen,39.5,17.4,186,3800,FEMALE Adelie,Torgersen,40.3,18,195,3250,FEMALE Adelie,Torgersen,36.7,19.3,193,3450,FEMALE Adelie,Torgersen,39.3,20.6,190,3650,MALE Adelie,Torgersen,38.9,17.8,181,3625,FEMALE Adelie,Torgersen,39.2,19.6,195,4675,MALE Adelie,Torgersen,41.1,17.6,182,3200,FEMALE Adelie,Torgersen,38.6,21.2,191,3800,MALE
Dovresti essere in grado di vedere sette caratteristiche che descrivono i pinguini. Utilizzeremo lo stesso set di funzionalità dei tutorial precedenti - 'culmen_length_mm', 'culmen_depth_mm', 'flipper_length_mm', 'body_mass_g' - e predire la 'specie' di un pinguino.
L'unica differenza sarà che i dati di input non sono preelaborati. Nota che non utilizzeremo altre funzionalità come "isola" o "sesso" in questo tutorial.
Prepara un file di schema
Come descritto nella validazione dei dati utilizzando TFX Pipeline e tensorflow Data Validation tutorial , abbiamo bisogno di un file di schema per il set di dati. Poiché il set di dati è diverso dall'esercitazione precedente, è necessario generarlo di nuovo. In questo tutorial, salteremo questi passaggi e utilizzeremo semplicemente un file di schema preparato.
import shutil
SCHEMA_PATH = 'schema'
_schema_uri = 'https://raw.githubusercontent.com/tensorflow/tfx/master/tfx/examples/penguin/schema/raw/schema.pbtxt'
_schema_filename = 'schema.pbtxt'
_schema_filepath = os.path.join(SCHEMA_PATH, _schema_filename)
os.makedirs(SCHEMA_PATH, exist_ok=True)
urllib.request.urlretrieve(_schema_uri, _schema_filepath)
('schema/schema.pbtxt', <http.client.HTTPMessage at 0x7f5b0ab20f50>)
Questo file di schema è stato creato con la stessa pipeline dell'esercitazione precedente senza modifiche manuali.
Crea una pipeline
Le pipeline TFX sono definite utilizzando le API Python. Noi aggiungeremo Transform componente per l'oleodotto che abbiamo creato nel tutorial di Convalida dati .
Un componente Transform richiede dati di ingresso di un ExampleGen componente e uno schema da una SchemaGen componente, e produce una "trasformazione grafico". L'uscita sarà utilizzato in un Trainer componente. Transform può produrre facoltativamente anche "dati trasformati", ovvero i dati materializzati dopo la trasformazione. Tuttavia, trasformeremo i dati durante l'addestramento in questo tutorial senza la materializzazione dei dati trasformati intermedi.
Una cosa da notare è che abbiamo bisogno di definire una funzione Python, preprocessing_fn per descrivere come dati di input devono essere trasformati. È simile a un componente Trainer che richiede anche il codice utente per la definizione del modello.
Scrivi codice di pre-elaborazione e addestramento
Dobbiamo definire due funzioni Python. Uno per Transform e uno per Trainer.
preprocessing_fn
La componente Transform troverà una funzione chiamata preprocessing_fn nel data file del modulo come abbiamo fatto per Trainer componente. È inoltre possibile specificare una funzione specifica utilizzando il preprocessing_fn parametro del componente Transform.
In questo esempio, eseguiremo due tipi di trasformazione. Per le caratteristiche numerici continui come culmen_length_mm e body_mass_g , noi normalizzare questi valori utilizzando la tft.scale_to_z_score funzione. Per la funzione etichetta, dobbiamo convertire le etichette delle stringhe in valori di indice numerico. Useremo tf.lookup.StaticHashTable per la conversione.
Per identificare campi trasformati facilmente, aggiungiamo un _xf suffisso ai nomi funzionalità trasformate.
run_fn
Il modello stesso è quasi lo stesso dei tutorial precedenti, ma questa volta trasformeremo i dati di input utilizzando il grafico di trasformazione dal componente Trasforma.
Un'altra differenza importante rispetto al tutorial precedente è che ora esportiamo un modello per servire che include non solo il grafico di calcolo del modello, ma anche il grafico di trasformazione per la preelaborazione, che viene generato nel componente Trasforma. Dobbiamo definire una funzione separata che verrà utilizzata per servire le richieste in entrata. Si può vedere che la stessa funzione _apply_preprocessing è stato utilizzato per entrambi i dati di allenamento e la richiesta di servire.
_module_file = 'penguin_utils.py'
%%writefile {_module_file}
from typing import List, Text
from absl import logging
import tensorflow as tf
from tensorflow import keras
from tensorflow_metadata.proto.v0 import schema_pb2
import tensorflow_transform as tft
from tensorflow_transform.tf_metadata import schema_utils
from tfx import v1 as tfx
from tfx_bsl.public import tfxio
# Specify features that we will use.
_FEATURE_KEYS = [
'culmen_length_mm', 'culmen_depth_mm', 'flipper_length_mm', 'body_mass_g'
]
_LABEL_KEY = 'species'
_TRAIN_BATCH_SIZE = 20
_EVAL_BATCH_SIZE = 10
# NEW: TFX Transform will call this function.
def preprocessing_fn(inputs):
"""tf.transform's callback function for preprocessing inputs.
Args:
inputs: map from feature keys to raw not-yet-transformed features.
Returns:
Map from string feature key to transformed feature.
"""
outputs = {}
# Uses features defined in _FEATURE_KEYS only.
for key in _FEATURE_KEYS:
# tft.scale_to_z_score computes the mean and variance of the given feature
# and scales the output based on the result.
outputs[key] = tft.scale_to_z_score(inputs[key])
# For the label column we provide the mapping from string to index.
# We could instead use `tft.compute_and_apply_vocabulary()` in order to
# compute the vocabulary dynamically and perform a lookup.
# Since in this example there are only 3 possible values, we use a hard-coded
# table for simplicity.
table_keys = ['Adelie', 'Chinstrap', 'Gentoo']
initializer = tf.lookup.KeyValueTensorInitializer(
keys=table_keys,
values=tf.cast(tf.range(len(table_keys)), tf.int64),
key_dtype=tf.string,
value_dtype=tf.int64)
table = tf.lookup.StaticHashTable(initializer, default_value=-1)
outputs[_LABEL_KEY] = table.lookup(inputs[_LABEL_KEY])
return outputs
# NEW: This function will apply the same transform operation to training data
# and serving requests.
def _apply_preprocessing(raw_features, tft_layer):
transformed_features = tft_layer(raw_features)
if _LABEL_KEY in raw_features:
transformed_label = transformed_features.pop(_LABEL_KEY)
return transformed_features, transformed_label
else:
return transformed_features, None
# NEW: This function will create a handler function which gets a serialized
# tf.example, preprocess and run an inference with it.
def _get_serve_tf_examples_fn(model, tf_transform_output):
# We must save the tft_layer to the model to ensure its assets are kept and
# tracked.
model.tft_layer = tf_transform_output.transform_features_layer()
@tf.function(input_signature=[
tf.TensorSpec(shape=[None], dtype=tf.string, name='examples')
])
def serve_tf_examples_fn(serialized_tf_examples):
# Expected input is a string which is serialized tf.Example format.
feature_spec = tf_transform_output.raw_feature_spec()
# Because input schema includes unnecessary fields like 'species' and
# 'island', we filter feature_spec to include required keys only.
required_feature_spec = {
k: v for k, v in feature_spec.items() if k in _FEATURE_KEYS
}
parsed_features = tf.io.parse_example(serialized_tf_examples,
required_feature_spec)
# Preprocess parsed input with transform operation defined in
# preprocessing_fn().
transformed_features, _ = _apply_preprocessing(parsed_features,
model.tft_layer)
# Run inference with ML model.
return model(transformed_features)
return serve_tf_examples_fn
def _input_fn(file_pattern: List[Text],
data_accessor: tfx.components.DataAccessor,
tf_transform_output: tft.TFTransformOutput,
batch_size: int = 200) -> tf.data.Dataset:
"""Generates features and label for tuning/training.
Args:
file_pattern: List of paths or patterns of input tfrecord files.
data_accessor: DataAccessor for converting input to RecordBatch.
tf_transform_output: A TFTransformOutput.
batch_size: representing the number of consecutive elements of returned
dataset to combine in a single batch
Returns:
A dataset that contains (features, indices) tuple where features is a
dictionary of Tensors, and indices is a single Tensor of label indices.
"""
dataset = data_accessor.tf_dataset_factory(
file_pattern,
tfxio.TensorFlowDatasetOptions(batch_size=batch_size),
schema=tf_transform_output.raw_metadata.schema)
transform_layer = tf_transform_output.transform_features_layer()
def apply_transform(raw_features):
return _apply_preprocessing(raw_features, transform_layer)
return dataset.map(apply_transform).repeat()
def _build_keras_model() -> tf.keras.Model:
"""Creates a DNN Keras model for classifying penguin data.
Returns:
A Keras Model.
"""
# The model below is built with Functional API, please refer to
# https://www.tensorflow.org/guide/keras/overview for all API options.
inputs = [
keras.layers.Input(shape=(1,), name=key)
for key in _FEATURE_KEYS
]
d = keras.layers.concatenate(inputs)
for _ in range(2):
d = keras.layers.Dense(8, activation='relu')(d)
outputs = keras.layers.Dense(3)(d)
model = keras.Model(inputs=inputs, outputs=outputs)
model.compile(
optimizer=keras.optimizers.Adam(1e-2),
loss=tf.keras.losses.SparseCategoricalCrossentropy(from_logits=True),
metrics=[keras.metrics.SparseCategoricalAccuracy()])
model.summary(print_fn=logging.info)
return model
# TFX Trainer will call this function.
def run_fn(fn_args: tfx.components.FnArgs):
"""Train the model based on given args.
Args:
fn_args: Holds args used to train the model as name/value pairs.
"""
tf_transform_output = tft.TFTransformOutput(fn_args.transform_output)
train_dataset = _input_fn(
fn_args.train_files,
fn_args.data_accessor,
tf_transform_output,
batch_size=_TRAIN_BATCH_SIZE)
eval_dataset = _input_fn(
fn_args.eval_files,
fn_args.data_accessor,
tf_transform_output,
batch_size=_EVAL_BATCH_SIZE)
model = _build_keras_model()
model.fit(
train_dataset,
steps_per_epoch=fn_args.train_steps,
validation_data=eval_dataset,
validation_steps=fn_args.eval_steps)
# NEW: Save a computation graph including transform layer.
signatures = {
'serving_default': _get_serve_tf_examples_fn(model, tf_transform_output),
}
model.save(fn_args.serving_model_dir, save_format='tf', signatures=signatures)
Writing penguin_utils.py
Ora hai completato tutti i passaggi di preparazione per creare una pipeline TFX.
Scrivi una definizione di pipeline
Definiamo una funzione per creare una pipeline TFX. Un Pipeline oggetto rappresenta una pipeline TFX, che può essere eseguito utilizzando uno dei sistemi di conduttura orchestrazione che supporta TFX.
def _create_pipeline(pipeline_name: str, pipeline_root: str, data_root: str,
schema_path: str, module_file: str, serving_model_dir: str,
metadata_path: str) -> tfx.dsl.Pipeline:
"""Implements the penguin pipeline with TFX."""
# Brings data into the pipeline or otherwise joins/converts training data.
example_gen = tfx.components.CsvExampleGen(input_base=data_root)
# Computes statistics over data for visualization and example validation.
statistics_gen = tfx.components.StatisticsGen(
examples=example_gen.outputs['examples'])
# Import the schema.
schema_importer = tfx.dsl.Importer(
source_uri=schema_path,
artifact_type=tfx.types.standard_artifacts.Schema).with_id(
'schema_importer')
# Performs anomaly detection based on statistics and data schema.
example_validator = tfx.components.ExampleValidator(
statistics=statistics_gen.outputs['statistics'],
schema=schema_importer.outputs['result'])
# NEW: Transforms input data using preprocessing_fn in the 'module_file'.
transform = tfx.components.Transform(
examples=example_gen.outputs['examples'],
schema=schema_importer.outputs['result'],
materialize=False,
module_file=module_file)
# Uses user-provided Python function that trains a model.
trainer = tfx.components.Trainer(
module_file=module_file,
examples=example_gen.outputs['examples'],
# NEW: Pass transform_graph to the trainer.
transform_graph=transform.outputs['transform_graph'],
train_args=tfx.proto.TrainArgs(num_steps=100),
eval_args=tfx.proto.EvalArgs(num_steps=5))
# Pushes the model to a filesystem destination.
pusher = tfx.components.Pusher(
model=trainer.outputs['model'],
push_destination=tfx.proto.PushDestination(
filesystem=tfx.proto.PushDestination.Filesystem(
base_directory=serving_model_dir)))
components = [
example_gen,
statistics_gen,
schema_importer,
example_validator,
transform, # NEW: Transform component was added to the pipeline.
trainer,
pusher,
]
return tfx.dsl.Pipeline(
pipeline_name=pipeline_name,
pipeline_root=pipeline_root,
metadata_connection_config=tfx.orchestration.metadata
.sqlite_metadata_connection_config(metadata_path),
components=components)
Esegui la pipeline
Useremo LocalDagRunner come nel precedente tutorial.
tfx.orchestration.LocalDagRunner().run(
_create_pipeline(
pipeline_name=PIPELINE_NAME,
pipeline_root=PIPELINE_ROOT,
data_root=DATA_ROOT,
schema_path=SCHEMA_PATH,
module_file=_module_file,
serving_model_dir=SERVING_MODEL_DIR,
metadata_path=METADATA_PATH))
INFO:absl:Excluding no splits because exclude_splits is not set.
INFO:absl:Excluding no splits because exclude_splits is not set.
INFO:absl:Generating ephemeral wheel package for '/tmpfs/src/temp/docs/tutorials/tfx/penguin_utils.py' (including modules: ['penguin_utils']).
INFO:absl:User module package has hash fingerprint version a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9.
INFO:absl:Executing: ['/tmpfs/src/tf_docs_env/bin/python', '/tmp/tmp_rl2wpg3/_tfx_generated_setup.py', 'bdist_wheel', '--bdist-dir', '/tmp/tmps7emqvj6', '--dist-dir', '/tmp/tmpnvanprdd']
/tmpfs/src/tf_docs_env/lib/python3.7/site-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
setuptools.SetuptoolsDeprecationWarning,
listing git files failed - pretending there aren't any
INFO:absl:Successfully built user code wheel distribution at 'pipelines/penguin-transform/_wheels/tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl'; target user module is 'penguin_utils'.
INFO:absl:Full user module path is 'penguin_utils@pipelines/penguin-transform/_wheels/tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl'
INFO:absl:Generating ephemeral wheel package for '/tmpfs/src/temp/docs/tutorials/tfx/penguin_utils.py' (including modules: ['penguin_utils']).
INFO:absl:User module package has hash fingerprint version a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9.
INFO:absl:Executing: ['/tmpfs/src/tf_docs_env/bin/python', '/tmp/tmpi9sy085o/_tfx_generated_setup.py', 'bdist_wheel', '--bdist-dir', '/tmp/tmpugc_ecw_', '--dist-dir', '/tmp/tmpr1xz5bg6']
running bdist_wheel
running build
running build_py
creating build
creating build/lib
copying penguin_utils.py -> build/lib
installing to /tmp/tmps7emqvj6
running install
running install_lib
copying build/lib/penguin_utils.py -> /tmp/tmps7emqvj6
running install_egg_info
running egg_info
creating tfx_user_code_Transform.egg-info
writing tfx_user_code_Transform.egg-info/PKG-INFO
writing dependency_links to tfx_user_code_Transform.egg-info/dependency_links.txt
writing top-level names to tfx_user_code_Transform.egg-info/top_level.txt
writing manifest file 'tfx_user_code_Transform.egg-info/SOURCES.txt'
reading manifest file 'tfx_user_code_Transform.egg-info/SOURCES.txt'
writing manifest file 'tfx_user_code_Transform.egg-info/SOURCES.txt'
Copying tfx_user_code_Transform.egg-info to /tmp/tmps7emqvj6/tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3.7.egg-info
running install_scripts
creating /tmp/tmps7emqvj6/tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9.dist-info/WHEEL
creating '/tmp/tmpnvanprdd/tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl' and adding '/tmp/tmps7emqvj6' to it
adding 'penguin_utils.py'
adding 'tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9.dist-info/METADATA'
adding 'tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9.dist-info/WHEEL'
adding 'tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9.dist-info/top_level.txt'
adding 'tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9.dist-info/RECORD'
removing /tmp/tmps7emqvj6
/tmpfs/src/tf_docs_env/lib/python3.7/site-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
setuptools.SetuptoolsDeprecationWarning,
listing git files failed - pretending there aren't any
INFO:absl:Successfully built user code wheel distribution at 'pipelines/penguin-transform/_wheels/tfx_user_code_Trainer-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl'; target user module is 'penguin_utils'.
INFO:absl:Full user module path is 'penguin_utils@pipelines/penguin-transform/_wheels/tfx_user_code_Trainer-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl'
INFO:absl:Using deployment config:
executor_specs {
key: "CsvExampleGen"
value {
beam_executable_spec {
python_executor_spec {
class_path: "tfx.components.example_gen.csv_example_gen.executor.Executor"
}
}
}
}
executor_specs {
key: "ExampleValidator"
value {
python_class_executable_spec {
class_path: "tfx.components.example_validator.executor.Executor"
}
}
}
executor_specs {
key: "Pusher"
value {
python_class_executable_spec {
class_path: "tfx.components.pusher.executor.Executor"
}
}
}
executor_specs {
key: "StatisticsGen"
value {
beam_executable_spec {
python_executor_spec {
class_path: "tfx.components.statistics_gen.executor.Executor"
}
}
}
}
executor_specs {
key: "Trainer"
value {
python_class_executable_spec {
class_path: "tfx.components.trainer.executor.GenericExecutor"
}
}
}
executor_specs {
key: "Transform"
value {
beam_executable_spec {
python_executor_spec {
class_path: "tfx.components.transform.executor.Executor"
}
}
}
}
custom_driver_specs {
key: "CsvExampleGen"
value {
python_class_executable_spec {
class_path: "tfx.components.example_gen.driver.FileBasedDriver"
}
}
}
metadata_connection_config {
sqlite {
filename_uri: "metadata/penguin-transform/metadata.db"
connection_mode: READWRITE_OPENCREATE
}
}
INFO:absl:Using connection config:
sqlite {
filename_uri: "metadata/penguin-transform/metadata.db"
connection_mode: READWRITE_OPENCREATE
}
INFO:absl:Component CsvExampleGen is running.
INFO:absl:Running launcher for node_info {
type {
name: "tfx.components.example_gen.csv_example_gen.component.CsvExampleGen"
}
id: "CsvExampleGen"
}
contexts {
contexts {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-transform"
}
}
}
contexts {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T10:21:51.187624"
}
}
}
contexts {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-transform.CsvExampleGen"
}
}
}
}
outputs {
outputs {
key: "examples"
value {
artifact_spec {
type {
name: "Examples"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
properties {
key: "version"
value: INT
}
}
}
}
}
}
parameters {
parameters {
key: "input_base"
value {
field_value {
string_value: "/tmp/tfx-dataacmxfq9f"
}
}
}
parameters {
key: "input_config"
value {
field_value {
string_value: "{\n \"splits\": [\n {\n \"name\": \"single_split\",\n \"pattern\": \"*\"\n }\n ]\n}"
}
}
}
parameters {
key: "output_config"
value {
field_value {
string_value: "{\n \"split_config\": {\n \"splits\": [\n {\n \"hash_buckets\": 2,\n \"name\": \"train\"\n },\n {\n \"hash_buckets\": 1,\n \"name\": \"eval\"\n }\n ]\n }\n}"
}
}
}
parameters {
key: "output_data_format"
value {
field_value {
int_value: 6
}
}
}
parameters {
key: "output_file_format"
value {
field_value {
int_value: 5
}
}
}
}
downstream_nodes: "StatisticsGen"
downstream_nodes: "Trainer"
downstream_nodes: "Transform"
execution_options {
caching_options {
}
}
INFO:absl:MetadataStore with DB connection initialized
running bdist_wheel
running build
running build_py
creating build
creating build/lib
copying penguin_utils.py -> build/lib
installing to /tmp/tmpugc_ecw_
running install
running install_lib
copying build/lib/penguin_utils.py -> /tmp/tmpugc_ecw_
running install_egg_info
running egg_info
creating tfx_user_code_Trainer.egg-info
writing tfx_user_code_Trainer.egg-info/PKG-INFO
writing dependency_links to tfx_user_code_Trainer.egg-info/dependency_links.txt
writing top-level names to tfx_user_code_Trainer.egg-info/top_level.txt
writing manifest file 'tfx_user_code_Trainer.egg-info/SOURCES.txt'
reading manifest file 'tfx_user_code_Trainer.egg-info/SOURCES.txt'
writing manifest file 'tfx_user_code_Trainer.egg-info/SOURCES.txt'
Copying tfx_user_code_Trainer.egg-info to /tmp/tmpugc_ecw_/tfx_user_code_Trainer-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3.7.egg-info
running install_scripts
creating /tmp/tmpugc_ecw_/tfx_user_code_Trainer-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9.dist-info/WHEEL
creating '/tmp/tmpr1xz5bg6/tfx_user_code_Trainer-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl' and adding '/tmp/tmpugc_ecw_' to it
adding 'penguin_utils.py'
adding 'tfx_user_code_Trainer-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9.dist-info/METADATA'
adding 'tfx_user_code_Trainer-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9.dist-info/WHEEL'
adding 'tfx_user_code_Trainer-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9.dist-info/top_level.txt'
adding 'tfx_user_code_Trainer-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9.dist-info/RECORD'
removing /tmp/tmpugc_ecw_
WARNING: Logging before InitGoogleLogging() is written to STDERR
I1205 10:21:51.351922 24712 rdbms_metadata_access_object.cc:686] No property is defined for the Type
I1205 10:21:52.158721 24712 rdbms_metadata_access_object.cc:686] No property is defined for the Type
I1205 10:21:52.173334 24712 rdbms_metadata_access_object.cc:686] No property is defined for the Type
I1205 10:21:52.180279 24712 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:select span and version = (0, None)
INFO:absl:latest span and version = (0, None)
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Going to run a new execution 1
I1205 10:21:52.194584 24712 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:Going to run a new execution: ExecutionInfo(execution_id=1, input_dict={}, output_dict=defaultdict(<class 'list'>, {'examples': [Artifact(artifact: uri: "pipelines/penguin-transform/CsvExampleGen/examples/1"
custom_properties {
key: "input_fingerprint"
value {
string_value: "split:single_split,num_files:1,total_bytes:13161,xor_checksum:1638699709,sum_checksum:1638699709"
}
}
custom_properties {
key: "name"
value {
string_value: "penguin-transform:2021-12-05T10:21:51.187624:CsvExampleGen:examples:0"
}
}
custom_properties {
key: "span"
value {
int_value: 0
}
}
, artifact_type: name: "Examples"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
properties {
key: "version"
value: INT
}
)]}), exec_properties={'output_config': '{\n "split_config": {\n "splits": [\n {\n "hash_buckets": 2,\n "name": "train"\n },\n {\n "hash_buckets": 1,\n "name": "eval"\n }\n ]\n }\n}', 'input_config': '{\n "splits": [\n {\n "name": "single_split",\n "pattern": "*"\n }\n ]\n}', 'output_file_format': 5, 'output_data_format': 6, 'input_base': '/tmp/tfx-dataacmxfq9f', 'span': 0, 'version': None, 'input_fingerprint': 'split:single_split,num_files:1,total_bytes:13161,xor_checksum:1638699709,sum_checksum:1638699709'}, execution_output_uri='pipelines/penguin-transform/CsvExampleGen/.system/executor_execution/1/executor_output.pb', stateful_working_dir='pipelines/penguin-transform/CsvExampleGen/.system/stateful_working_dir/2021-12-05T10:21:51.187624', tmp_dir='pipelines/penguin-transform/CsvExampleGen/.system/executor_execution/1/.temp/', pipeline_node=node_info {
type {
name: "tfx.components.example_gen.csv_example_gen.component.CsvExampleGen"
}
id: "CsvExampleGen"
}
contexts {
contexts {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-transform"
}
}
}
contexts {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T10:21:51.187624"
}
}
}
contexts {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-transform.CsvExampleGen"
}
}
}
}
outputs {
outputs {
key: "examples"
value {
artifact_spec {
type {
name: "Examples"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
properties {
key: "version"
value: INT
}
}
}
}
}
}
parameters {
parameters {
key: "input_base"
value {
field_value {
string_value: "/tmp/tfx-dataacmxfq9f"
}
}
}
parameters {
key: "input_config"
value {
field_value {
string_value: "{\n \"splits\": [\n {\n \"name\": \"single_split\",\n \"pattern\": \"*\"\n }\n ]\n}"
}
}
}
parameters {
key: "output_config"
value {
field_value {
string_value: "{\n \"split_config\": {\n \"splits\": [\n {\n \"hash_buckets\": 2,\n \"name\": \"train\"\n },\n {\n \"hash_buckets\": 1,\n \"name\": \"eval\"\n }\n ]\n }\n}"
}
}
}
parameters {
key: "output_data_format"
value {
field_value {
int_value: 6
}
}
}
parameters {
key: "output_file_format"
value {
field_value {
int_value: 5
}
}
}
}
downstream_nodes: "StatisticsGen"
downstream_nodes: "Trainer"
downstream_nodes: "Transform"
execution_options {
caching_options {
}
}
, pipeline_info=id: "penguin-transform"
, pipeline_run_id='2021-12-05T10:21:51.187624')
INFO:absl:Generating examples.
WARNING:apache_beam.runners.interactive.interactive_environment:Dependencies required for Interactive Beam PCollection visualization are not available, please use: `pip install apache-beam[interactive]` to install necessary dependencies to enable all data visualization features.
INFO:absl:Processing input csv data /tmp/tfx-dataacmxfq9f/* to TFExample.
WARNING:root:Make sure that locally built Python SDK docker image has Python 3.7 interpreter.
WARNING:apache_beam.io.tfrecordio:Couldn't find python-snappy so the implementation of _TFRecordUtil._masked_crc32c is not as fast as it could be.
INFO:absl:Examples generated.
INFO:absl:Cleaning up stateless execution info.
INFO:absl:Execution 1 succeeded.
INFO:absl:Cleaning up stateful execution info.
INFO:absl:Publishing output artifacts defaultdict(<class 'list'>, {'examples': [Artifact(artifact: uri: "pipelines/penguin-transform/CsvExampleGen/examples/1"
custom_properties {
key: "input_fingerprint"
value {
string_value: "split:single_split,num_files:1,total_bytes:13161,xor_checksum:1638699709,sum_checksum:1638699709"
}
}
custom_properties {
key: "name"
value {
string_value: "penguin-transform:2021-12-05T10:21:51.187624:CsvExampleGen:examples:0"
}
}
custom_properties {
key: "span"
value {
int_value: 0
}
}
custom_properties {
key: "tfx_version"
value {
string_value: "1.4.0"
}
}
, artifact_type: name: "Examples"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
properties {
key: "version"
value: INT
}
)]}) for execution 1
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Component CsvExampleGen is finished.
INFO:absl:Component schema_importer is running.
INFO:absl:Running launcher for node_info {
type {
name: "tfx.dsl.components.common.importer.Importer"
}
id: "schema_importer"
}
contexts {
contexts {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-transform"
}
}
}
contexts {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T10:21:51.187624"
}
}
}
contexts {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-transform.schema_importer"
}
}
}
}
outputs {
outputs {
key: "result"
value {
artifact_spec {
type {
name: "Schema"
}
}
}
}
}
parameters {
parameters {
key: "artifact_uri"
value {
field_value {
string_value: "schema"
}
}
}
parameters {
key: "reimport"
value {
field_value {
int_value: 0
}
}
}
}
downstream_nodes: "ExampleValidator"
downstream_nodes: "Transform"
execution_options {
caching_options {
}
}
INFO:absl:Running as an importer node.
INFO:absl:MetadataStore with DB connection initialized
I1205 10:21:53.330585 24712 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:Processing source uri: schema, properties: {}, custom_properties: {}
I1205 10:21:53.340232 24712 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:Component schema_importer is finished.
INFO:absl:Component StatisticsGen is running.
INFO:absl:Running launcher for node_info {
type {
name: "tfx.components.statistics_gen.component.StatisticsGen"
}
id: "StatisticsGen"
}
contexts {
contexts {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-transform"
}
}
}
contexts {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T10:21:51.187624"
}
}
}
contexts {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-transform.StatisticsGen"
}
}
}
}
inputs {
inputs {
key: "examples"
value {
channels {
producer_node_query {
id: "CsvExampleGen"
}
context_queries {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-transform"
}
}
}
context_queries {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T10:21:51.187624"
}
}
}
context_queries {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-transform.CsvExampleGen"
}
}
}
artifact_query {
type {
name: "Examples"
}
}
output_key: "examples"
}
min_count: 1
}
}
}
outputs {
outputs {
key: "statistics"
value {
artifact_spec {
type {
name: "ExampleStatistics"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
}
}
}
}
}
parameters {
parameters {
key: "exclude_splits"
value {
field_value {
string_value: "[]"
}
}
}
}
upstream_nodes: "CsvExampleGen"
downstream_nodes: "ExampleValidator"
execution_options {
caching_options {
}
}
INFO:absl:MetadataStore with DB connection initialized
I1205 10:21:53.360662 24712 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Going to run a new execution 3
INFO:absl:Going to run a new execution: ExecutionInfo(execution_id=3, input_dict={'examples': [Artifact(artifact: id: 1
type_id: 15
uri: "pipelines/penguin-transform/CsvExampleGen/examples/1"
properties {
key: "split_names"
value {
string_value: "[\"train\", \"eval\"]"
}
}
custom_properties {
key: "file_format"
value {
string_value: "tfrecords_gzip"
}
}
custom_properties {
key: "input_fingerprint"
value {
string_value: "split:single_split,num_files:1,total_bytes:13161,xor_checksum:1638699709,sum_checksum:1638699709"
}
}
custom_properties {
key: "name"
value {
string_value: "penguin-transform:2021-12-05T10:21:51.187624:CsvExampleGen:examples:0"
}
}
custom_properties {
key: "payload_format"
value {
string_value: "FORMAT_TF_EXAMPLE"
}
}
custom_properties {
key: "span"
value {
int_value: 0
}
}
custom_properties {
key: "tfx_version"
value {
string_value: "1.4.0"
}
}
state: LIVE
create_time_since_epoch: 1638699713316
last_update_time_since_epoch: 1638699713316
, artifact_type: id: 15
name: "Examples"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
properties {
key: "version"
value: INT
}
)]}, output_dict=defaultdict(<class 'list'>, {'statistics': [Artifact(artifact: uri: "pipelines/penguin-transform/StatisticsGen/statistics/3"
custom_properties {
key: "name"
value {
string_value: "penguin-transform:2021-12-05T10:21:51.187624:StatisticsGen:statistics:0"
}
}
, artifact_type: name: "ExampleStatistics"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
)]}), exec_properties={'exclude_splits': '[]'}, execution_output_uri='pipelines/penguin-transform/StatisticsGen/.system/executor_execution/3/executor_output.pb', stateful_working_dir='pipelines/penguin-transform/StatisticsGen/.system/stateful_working_dir/2021-12-05T10:21:51.187624', tmp_dir='pipelines/penguin-transform/StatisticsGen/.system/executor_execution/3/.temp/', pipeline_node=node_info {
type {
name: "tfx.components.statistics_gen.component.StatisticsGen"
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id: "StatisticsGen"
}
contexts {
contexts {
type {
name: "pipeline"
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name {
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}
}
contexts {
type {
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}
name {
field_value {
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}
}
contexts {
type {
name: "node"
}
name {
field_value {
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}
inputs {
inputs {
key: "examples"
value {
channels {
producer_node_query {
id: "CsvExampleGen"
}
context_queries {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-transform"
}
}
}
context_queries {
type {
name: "pipeline_run"
}
name {
field_value {
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}
}
context_queries {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-transform.CsvExampleGen"
}
}
}
artifact_query {
type {
name: "Examples"
}
}
output_key: "examples"
}
min_count: 1
}
}
}
outputs {
outputs {
key: "statistics"
value {
artifact_spec {
type {
name: "ExampleStatistics"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
}
}
}
}
}
parameters {
parameters {
key: "exclude_splits"
value {
field_value {
string_value: "[]"
}
}
}
}
upstream_nodes: "CsvExampleGen"
downstream_nodes: "ExampleValidator"
execution_options {
caching_options {
}
}
, pipeline_info=id: "penguin-transform"
, pipeline_run_id='2021-12-05T10:21:51.187624')
INFO:absl:Generating statistics for split train.
INFO:absl:Statistics for split train written to pipelines/penguin-transform/StatisticsGen/statistics/3/Split-train.
INFO:absl:Generating statistics for split eval.
INFO:absl:Statistics for split eval written to pipelines/penguin-transform/StatisticsGen/statistics/3/Split-eval.
WARNING:root:Make sure that locally built Python SDK docker image has Python 3.7 interpreter.
INFO:absl:Cleaning up stateless execution info.
INFO:absl:Execution 3 succeeded.
INFO:absl:Cleaning up stateful execution info.
INFO:absl:Publishing output artifacts defaultdict(<class 'list'>, {'statistics': [Artifact(artifact: uri: "pipelines/penguin-transform/StatisticsGen/statistics/3"
custom_properties {
key: "name"
value {
string_value: "penguin-transform:2021-12-05T10:21:51.187624:StatisticsGen:statistics:0"
}
}
custom_properties {
key: "tfx_version"
value {
string_value: "1.4.0"
}
}
, artifact_type: name: "ExampleStatistics"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
)]}) for execution 3
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Component StatisticsGen is finished.
INFO:absl:Component Transform is running.
INFO:absl:Running launcher for node_info {
type {
name: "tfx.components.transform.component.Transform"
}
id: "Transform"
}
contexts {
contexts {
type {
name: "pipeline"
}
name {
field_value {
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}
}
}
contexts {
type {
name: "pipeline_run"
}
name {
field_value {
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}
}
contexts {
type {
name: "node"
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name {
field_value {
string_value: "penguin-transform.Transform"
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}
}
}
inputs {
inputs {
key: "examples"
value {
channels {
producer_node_query {
id: "CsvExampleGen"
}
context_queries {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-transform"
}
}
}
context_queries {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T10:21:51.187624"
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}
}
context_queries {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-transform.CsvExampleGen"
}
}
}
artifact_query {
type {
name: "Examples"
}
}
output_key: "examples"
}
min_count: 1
}
}
inputs {
key: "schema"
value {
channels {
producer_node_query {
id: "schema_importer"
}
context_queries {
type {
name: "pipeline"
}
name {
field_value {
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}
}
context_queries {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T10:21:51.187624"
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}
}
context_queries {
type {
name: "node"
}
name {
field_value {
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}
}
}
artifact_query {
type {
name: "Schema"
}
}
output_key: "result"
}
min_count: 1
}
}
}
outputs {
outputs {
key: "post_transform_anomalies"
value {
artifact_spec {
type {
name: "ExampleAnomalies"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
}
}
}
}
outputs {
key: "post_transform_schema"
value {
artifact_spec {
type {
name: "Schema"
}
}
}
}
outputs {
key: "post_transform_stats"
value {
artifact_spec {
type {
name: "ExampleStatistics"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
}
}
}
}
outputs {
key: "pre_transform_schema"
value {
artifact_spec {
type {
name: "Schema"
}
}
}
}
outputs {
key: "pre_transform_stats"
value {
artifact_spec {
type {
name: "ExampleStatistics"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
}
}
}
}
outputs {
key: "transform_graph"
value {
artifact_spec {
type {
name: "TransformGraph"
}
}
}
}
outputs {
key: "updated_analyzer_cache"
value {
artifact_spec {
type {
name: "TransformCache"
}
}
}
}
}
parameters {
parameters {
key: "custom_config"
value {
field_value {
string_value: "null"
}
}
}
parameters {
key: "disable_statistics"
value {
field_value {
int_value: 0
}
}
}
parameters {
key: "force_tf_compat_v1"
value {
field_value {
int_value: 0
}
}
}
parameters {
key: "module_path"
value {
field_value {
string_value: "penguin_utils@pipelines/penguin-transform/_wheels/tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl"
}
}
}
}
upstream_nodes: "CsvExampleGen"
upstream_nodes: "schema_importer"
downstream_nodes: "Trainer"
execution_options {
caching_options {
}
}
INFO:absl:MetadataStore with DB connection initialized
I1205 10:21:56.029392 24712 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Going to run a new execution 4
INFO:absl:Going to run a new execution: ExecutionInfo(execution_id=4, input_dict={'schema': [Artifact(artifact: id: 2
type_id: 17
uri: "schema"
custom_properties {
key: "tfx_version"
value {
string_value: "1.4.0"
}
}
state: LIVE
create_time_since_epoch: 1638699713343
last_update_time_since_epoch: 1638699713343
, artifact_type: id: 17
name: "Schema"
)], 'examples': [Artifact(artifact: id: 1
type_id: 15
uri: "pipelines/penguin-transform/CsvExampleGen/examples/1"
properties {
key: "split_names"
value {
string_value: "[\"train\", \"eval\"]"
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}
custom_properties {
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value {
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custom_properties {
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value {
string_value: "split:single_split,num_files:1,total_bytes:13161,xor_checksum:1638699709,sum_checksum:1638699709"
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custom_properties {
key: "name"
value {
string_value: "penguin-transform:2021-12-05T10:21:51.187624:CsvExampleGen:examples:0"
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}
custom_properties {
key: "payload_format"
value {
string_value: "FORMAT_TF_EXAMPLE"
}
}
custom_properties {
key: "span"
value {
int_value: 0
}
}
custom_properties {
key: "tfx_version"
value {
string_value: "1.4.0"
}
}
state: LIVE
create_time_since_epoch: 1638699713316
last_update_time_since_epoch: 1638699713316
, artifact_type: id: 15
name: "Examples"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
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}
properties {
key: "version"
value: INT
}
)]}, output_dict=defaultdict(<class 'list'>, {'updated_analyzer_cache': [Artifact(artifact: uri: "pipelines/penguin-transform/Transform/updated_analyzer_cache/4"
custom_properties {
key: "name"
value {
string_value: "penguin-transform:2021-12-05T10:21:51.187624:Transform:updated_analyzer_cache:0"
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}
, artifact_type: name: "TransformCache"
)], 'post_transform_stats': [Artifact(artifact: uri: "pipelines/penguin-transform/Transform/post_transform_stats/4"
custom_properties {
key: "name"
value {
string_value: "penguin-transform:2021-12-05T10:21:51.187624:Transform:post_transform_stats:0"
}
}
, artifact_type: name: "ExampleStatistics"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
)], 'pre_transform_stats': [Artifact(artifact: uri: "pipelines/penguin-transform/Transform/pre_transform_stats/4"
custom_properties {
key: "name"
value {
string_value: "penguin-transform:2021-12-05T10:21:51.187624:Transform:pre_transform_stats:0"
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}
, artifact_type: name: "ExampleStatistics"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
)], 'pre_transform_schema': [Artifact(artifact: uri: "pipelines/penguin-transform/Transform/pre_transform_schema/4"
custom_properties {
key: "name"
value {
string_value: "penguin-transform:2021-12-05T10:21:51.187624:Transform:pre_transform_schema:0"
}
}
, artifact_type: name: "Schema"
)], 'post_transform_anomalies': [Artifact(artifact: uri: "pipelines/penguin-transform/Transform/post_transform_anomalies/4"
custom_properties {
key: "name"
value {
string_value: "penguin-transform:2021-12-05T10:21:51.187624:Transform:post_transform_anomalies:0"
}
}
, artifact_type: name: "ExampleAnomalies"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
)], 'transform_graph': [Artifact(artifact: uri: "pipelines/penguin-transform/Transform/transform_graph/4"
custom_properties {
key: "name"
value {
string_value: "penguin-transform:2021-12-05T10:21:51.187624:Transform:transform_graph:0"
}
}
, artifact_type: name: "TransformGraph"
)], 'post_transform_schema': [Artifact(artifact: uri: "pipelines/penguin-transform/Transform/post_transform_schema/4"
custom_properties {
key: "name"
value {
string_value: "penguin-transform:2021-12-05T10:21:51.187624:Transform:post_transform_schema:0"
}
}
, artifact_type: name: "Schema"
)]}), exec_properties={'disable_statistics': 0, 'module_path': 'penguin_utils@pipelines/penguin-transform/_wheels/tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl', 'custom_config': 'null', 'force_tf_compat_v1': 0}, execution_output_uri='pipelines/penguin-transform/Transform/.system/executor_execution/4/executor_output.pb', stateful_working_dir='pipelines/penguin-transform/Transform/.system/stateful_working_dir/2021-12-05T10:21:51.187624', tmp_dir='pipelines/penguin-transform/Transform/.system/executor_execution/4/.temp/', pipeline_node=node_info {
type {
name: "tfx.components.transform.component.Transform"
}
id: "Transform"
}
contexts {
contexts {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-transform"
}
}
}
contexts {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T10:21:51.187624"
}
}
}
contexts {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-transform.Transform"
}
}
}
}
inputs {
inputs {
key: "examples"
value {
channels {
producer_node_query {
id: "CsvExampleGen"
}
context_queries {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-transform"
}
}
}
context_queries {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T10:21:51.187624"
}
}
}
context_queries {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-transform.CsvExampleGen"
}
}
}
artifact_query {
type {
name: "Examples"
}
}
output_key: "examples"
}
min_count: 1
}
}
inputs {
key: "schema"
value {
channels {
producer_node_query {
id: "schema_importer"
}
context_queries {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-transform"
}
}
}
context_queries {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T10:21:51.187624"
}
}
}
context_queries {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-transform.schema_importer"
}
}
}
artifact_query {
type {
name: "Schema"
}
}
output_key: "result"
}
min_count: 1
}
}
}
outputs {
outputs {
key: "post_transform_anomalies"
value {
artifact_spec {
type {
name: "ExampleAnomalies"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
}
}
}
}
outputs {
key: "post_transform_schema"
value {
artifact_spec {
type {
name: "Schema"
}
}
}
}
outputs {
key: "post_transform_stats"
value {
artifact_spec {
type {
name: "ExampleStatistics"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
}
}
}
}
outputs {
key: "pre_transform_schema"
value {
artifact_spec {
type {
name: "Schema"
}
}
}
}
outputs {
key: "pre_transform_stats"
value {
artifact_spec {
type {
name: "ExampleStatistics"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
}
}
}
}
outputs {
key: "transform_graph"
value {
artifact_spec {
type {
name: "TransformGraph"
}
}
}
}
outputs {
key: "updated_analyzer_cache"
value {
artifact_spec {
type {
name: "TransformCache"
}
}
}
}
}
parameters {
parameters {
key: "custom_config"
value {
field_value {
string_value: "null"
}
}
}
parameters {
key: "disable_statistics"
value {
field_value {
int_value: 0
}
}
}
parameters {
key: "force_tf_compat_v1"
value {
field_value {
int_value: 0
}
}
}
parameters {
key: "module_path"
value {
field_value {
string_value: "penguin_utils@pipelines/penguin-transform/_wheels/tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl"
}
}
}
}
upstream_nodes: "CsvExampleGen"
upstream_nodes: "schema_importer"
downstream_nodes: "Trainer"
execution_options {
caching_options {
}
}
, pipeline_info=id: "penguin-transform"
, pipeline_run_id='2021-12-05T10:21:51.187624')
INFO:absl:Analyze the 'train' split and transform all splits when splits_config is not set.
INFO:absl:udf_utils.get_fn {'module_file': None, 'module_path': 'penguin_utils@pipelines/penguin-transform/_wheels/tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl', 'preprocessing_fn': None} 'preprocessing_fn'
INFO:absl:Installing 'pipelines/penguin-transform/_wheels/tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl' to a temporary directory.
INFO:absl:Executing: ['/tmpfs/src/tf_docs_env/bin/python', '-m', 'pip', 'install', '--target', '/tmp/tmp3elppure', 'pipelines/penguin-transform/_wheels/tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl']
Processing ./pipelines/penguin-transform/_wheels/tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl
INFO:absl:Successfully installed 'pipelines/penguin-transform/_wheels/tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl'.
INFO:absl:udf_utils.get_fn {'module_file': None, 'module_path': 'penguin_utils@pipelines/penguin-transform/_wheels/tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl', 'stats_options_updater_fn': None} 'stats_options_updater_fn'
INFO:absl:Installing 'pipelines/penguin-transform/_wheels/tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl' to a temporary directory.
INFO:absl:Executing: ['/tmpfs/src/tf_docs_env/bin/python', '-m', 'pip', 'install', '--target', '/tmp/tmpctb52fyz', 'pipelines/penguin-transform/_wheels/tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl']
Installing collected packages: tfx-user-code-Transform
Successfully installed tfx-user-code-Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9
Processing ./pipelines/penguin-transform/_wheels/tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl
INFO:absl:Successfully installed 'pipelines/penguin-transform/_wheels/tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl'.
INFO:absl:Installing 'pipelines/penguin-transform/_wheels/tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl' to a temporary directory.
INFO:absl:Executing: ['/tmpfs/src/tf_docs_env/bin/python', '-m', 'pip', 'install', '--target', '/tmp/tmpgv9zk7st', 'pipelines/penguin-transform/_wheels/tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl']
Installing collected packages: tfx-user-code-Transform
Successfully installed tfx-user-code-Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9
Processing ./pipelines/penguin-transform/_wheels/tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl
INFO:absl:Successfully installed 'pipelines/penguin-transform/_wheels/tfx_user_code_Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl'.
INFO:absl:Feature body_mass_g has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_depth_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature flipper_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature island has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature sex has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature species has a shape dim {
size: 1
}
. Setting to DenseTensor.
Installing collected packages: tfx-user-code-Transform
Successfully installed tfx-user-code-Transform-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9
WARNING:tensorflow:From /tmpfs/src/tf_docs_env/lib/python3.7/site-packages/tensorflow_transform/tf_utils.py:289: Tensor.experimental_ref (from tensorflow.python.framework.ops) is deprecated and will be removed in a future version.
Instructions for updating:
Use ref() instead.
WARNING:tensorflow:From /tmpfs/src/tf_docs_env/lib/python3.7/site-packages/tensorflow_transform/tf_utils.py:289: Tensor.experimental_ref (from tensorflow.python.framework.ops) is deprecated and will be removed in a future version.
Instructions for updating:
Use ref() instead.
INFO:absl:Feature body_mass_g has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_depth_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature flipper_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature island has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature sex has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature species has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature body_mass_g has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_depth_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature flipper_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature island has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature sex has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature species has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature body_mass_g has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_depth_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature flipper_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature island has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature sex has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature species has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature body_mass_g has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_depth_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature flipper_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature island has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature sex has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature species has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature body_mass_g has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_depth_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature flipper_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature island has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature sex has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature species has a shape dim {
size: 1
}
. Setting to DenseTensor.
WARNING:root:This output type hint will be ignored and not used for type-checking purposes. Typically, output type hints for a PTransform are single (or nested) types wrapped by a PCollection, PDone, or None. Got: Tuple[Dict[str, Union[NoneType, _Dataset]], Union[Dict[str, Dict[str, PCollection]], NoneType], int] instead.
WARNING:absl:Tables initialized inside a tf.function will be re-initialized on every invocation of the function. This re-initialization can have significant impact on performance. Consider lifting them out of the graph context using `tf.init_scope`.: key_value_init/LookupTableImportV2
WARNING:absl:Tables initialized inside a tf.function will be re-initialized on every invocation of the function. This re-initialization can have significant impact on performance. Consider lifting them out of the graph context using `tf.init_scope`.: key_value_init/LookupTableImportV2
WARNING:root:This output type hint will be ignored and not used for type-checking purposes. Typically, output type hints for a PTransform are single (or nested) types wrapped by a PCollection, PDone, or None. Got: Tuple[Dict[str, Union[NoneType, _Dataset]], Union[Dict[str, Dict[str, PCollection]], NoneType], int] instead.
WARNING:absl:Tables initialized inside a tf.function will be re-initialized on every invocation of the function. This re-initialization can have significant impact on performance. Consider lifting them out of the graph context using `tf.init_scope`.: key_value_init/LookupTableImportV2
WARNING:absl:Tables initialized inside a tf.function will be re-initialized on every invocation of the function. This re-initialization can have significant impact on performance. Consider lifting them out of the graph context using `tf.init_scope`.: key_value_init/LookupTableImportV2
INFO:absl:Feature body_mass_g has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_depth_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature flipper_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature island has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature sex has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature species has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature body_mass_g has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_depth_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature flipper_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature island has a shape dim {
size: 1
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. Setting to DenseTensor.
INFO:absl:Feature sex has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature species has a shape dim {
size: 1
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. Setting to DenseTensor.
WARNING:root:Make sure that locally built Python SDK docker image has Python 3.7 interpreter.
2021-12-05 10:22:06.547139: W tensorflow/python/util/util.cc:348] Sets are not currently considered sequences, but this may change in the future, so consider avoiding using them.
INFO:tensorflow:Assets written to: pipelines/penguin-transform/Transform/transform_graph/4/.temp_path/tftransform_tmp/167780659a644435abe6c969ed4771de/assets
INFO:tensorflow:Assets written to: pipelines/penguin-transform/Transform/transform_graph/4/.temp_path/tftransform_tmp/167780659a644435abe6c969ed4771de/assets
WARNING:absl:Tables initialized inside a tf.function will be re-initialized on every invocation of the function. This re-initialization can have significant impact on performance. Consider lifting them out of the graph context using `tf.init_scope`.: key_value_init/LookupTableImportV2
INFO:tensorflow:tensorflow_text is not available.
INFO:tensorflow:tensorflow_text is not available.
INFO:tensorflow:tensorflow_decision_forests is not available.
INFO:tensorflow:tensorflow_decision_forests is not available.
INFO:tensorflow:struct2tensor is not available.
INFO:tensorflow:struct2tensor is not available.
INFO:tensorflow:Assets written to: pipelines/penguin-transform/Transform/transform_graph/4/.temp_path/tftransform_tmp/cbe53dc813ec4d51a99f25099bd3736e/assets
INFO:tensorflow:Assets written to: pipelines/penguin-transform/Transform/transform_graph/4/.temp_path/tftransform_tmp/cbe53dc813ec4d51a99f25099bd3736e/assets
WARNING:absl:Tables initialized inside a tf.function will be re-initialized on every invocation of the function. This re-initialization can have significant impact on performance. Consider lifting them out of the graph context using `tf.init_scope`.: key_value_init/LookupTableImportV2
INFO:tensorflow:tensorflow_text is not available.
INFO:tensorflow:tensorflow_text is not available.
INFO:tensorflow:tensorflow_decision_forests is not available.
INFO:tensorflow:tensorflow_decision_forests is not available.
INFO:tensorflow:struct2tensor is not available.
INFO:tensorflow:struct2tensor is not available.
INFO:tensorflow:tensorflow_text is not available.
INFO:tensorflow:tensorflow_text is not available.
INFO:tensorflow:tensorflow_decision_forests is not available.
INFO:tensorflow:tensorflow_decision_forests is not available.
INFO:tensorflow:struct2tensor is not available.
INFO:tensorflow:struct2tensor is not available.
INFO:absl:Cleaning up stateless execution info.
INFO:absl:Execution 4 succeeded.
INFO:absl:Cleaning up stateful execution info.
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INFO:absl:MetadataStore with DB connection initialized
I1205 10:22:11.698540 24712 rdbms_metadata_access_object.cc:686] No property is defined for the Type
I1205 10:22:11.707963 24712 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:Component Transform is finished.
INFO:absl:Component ExampleValidator is running.
INFO:absl:Running launcher for node_info {
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INFO:absl:MetadataStore with DB connection initialized
I1205 10:22:11.732254 24712 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Going to run a new execution 5
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INFO:absl:Validating schema against the computed statistics for split train.
INFO:absl:Validation complete for split train. Anomalies written to pipelines/penguin-transform/ExampleValidator/anomalies/5/Split-train.
INFO:absl:Validating schema against the computed statistics for split eval.
INFO:absl:Validation complete for split eval. Anomalies written to pipelines/penguin-transform/ExampleValidator/anomalies/5/Split-eval.
INFO:absl:Cleaning up stateless execution info.
INFO:absl:Execution 5 succeeded.
INFO:absl:Cleaning up stateful execution info.
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INFO:absl:MetadataStore with DB connection initialized
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INFO:absl:MetadataStore with DB connection initialized
I1205 10:22:11.785852 24712 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Going to run a new execution 6
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context_queries {
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name {
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string_value: "penguin-transform.CsvExampleGen"
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artifact_query {
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min_count: 1
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}
inputs {
key: "transform_graph"
value {
channels {
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context_queries {
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parameters {
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parameters {
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parameters {
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}
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parameters {
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field_value {
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upstream_nodes: "CsvExampleGen"
upstream_nodes: "Transform"
downstream_nodes: "Pusher"
execution_options {
caching_options {
}
}
, pipeline_info=id: "penguin-transform"
, pipeline_run_id='2021-12-05T10:21:51.187624')
INFO:absl:Train on the 'train' split when train_args.splits is not set.
INFO:absl:Evaluate on the 'eval' split when eval_args.splits is not set.
INFO:absl:udf_utils.get_fn {'custom_config': 'null', 'train_args': '{\n "num_steps": 100\n}', 'module_path': 'penguin_utils@pipelines/penguin-transform/_wheels/tfx_user_code_Trainer-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl', 'eval_args': '{\n "num_steps": 5\n}'} 'run_fn'
INFO:absl:Installing 'pipelines/penguin-transform/_wheels/tfx_user_code_Trainer-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl' to a temporary directory.
INFO:absl:Executing: ['/tmpfs/src/tf_docs_env/bin/python', '-m', 'pip', 'install', '--target', '/tmp/tmpfnmreae0', 'pipelines/penguin-transform/_wheels/tfx_user_code_Trainer-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl']
Processing ./pipelines/penguin-transform/_wheels/tfx_user_code_Trainer-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl
INFO:absl:Successfully installed 'pipelines/penguin-transform/_wheels/tfx_user_code_Trainer-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9-py3-none-any.whl'.
INFO:absl:Training model.
INFO:absl:Feature body_mass_g has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_depth_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature flipper_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature island has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature sex has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature species has a shape dim {
size: 1
}
. Setting to DenseTensor.
Installing collected packages: tfx-user-code-Trainer
Successfully installed tfx-user-code-Trainer-0.0+a5e9139bd7facf5026b5306a6aea534f89db0dea58ebe1bb1fb5ebb9df5fdea9
INFO:tensorflow:tensorflow_text is not available.
INFO:tensorflow:tensorflow_text is not available.
INFO:tensorflow:tensorflow_decision_forests is not available.
INFO:tensorflow:tensorflow_decision_forests is not available.
INFO:tensorflow:struct2tensor is not available.
INFO:tensorflow:struct2tensor is not available.
INFO:absl:Feature body_mass_g has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_depth_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature flipper_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature island has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature sex has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature species has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Model: "model"
INFO:absl:__________________________________________________________________________________________________
INFO:absl:Layer (type) Output Shape Param # Connected to
INFO:absl:==================================================================================================
INFO:absl:culmen_length_mm (InputLayer) [(None, 1)] 0
INFO:absl:__________________________________________________________________________________________________
INFO:absl:culmen_depth_mm (InputLayer) [(None, 1)] 0
INFO:absl:__________________________________________________________________________________________________
INFO:absl:flipper_length_mm (InputLayer) [(None, 1)] 0
INFO:absl:__________________________________________________________________________________________________
INFO:absl:body_mass_g (InputLayer) [(None, 1)] 0
INFO:absl:__________________________________________________________________________________________________
INFO:absl:concatenate (Concatenate) (None, 4) 0 culmen_length_mm[0][0]
INFO:absl: culmen_depth_mm[0][0]
INFO:absl: flipper_length_mm[0][0]
INFO:absl: body_mass_g[0][0]
INFO:absl:__________________________________________________________________________________________________
INFO:absl:dense (Dense) (None, 8) 40 concatenate[0][0]
INFO:absl:__________________________________________________________________________________________________
INFO:absl:dense_1 (Dense) (None, 8) 72 dense[0][0]
INFO:absl:__________________________________________________________________________________________________
INFO:absl:dense_2 (Dense) (None, 3) 27 dense_1[0][0]
INFO:absl:==================================================================================================
INFO:absl:Total params: 139
INFO:absl:Trainable params: 139
INFO:absl:Non-trainable params: 0
INFO:absl:__________________________________________________________________________________________________
100/100 [==============================] - 1s 4ms/step - loss: 0.2132 - sparse_categorical_accuracy: 0.9490 - val_loss: 0.0102 - val_sparse_categorical_accuracy: 1.0000
INFO:tensorflow:Assets written to: pipelines/penguin-transform/Trainer/model/6/Format-Serving/assets
INFO:tensorflow:Assets written to: pipelines/penguin-transform/Trainer/model/6/Format-Serving/assets
INFO:absl:Training complete. Model written to pipelines/penguin-transform/Trainer/model/6/Format-Serving. ModelRun written to pipelines/penguin-transform/Trainer/model_run/6
INFO:absl:Cleaning up stateless execution info.
INFO:absl:Execution 6 succeeded.
INFO:absl:Cleaning up stateful execution info.
INFO:absl:Publishing output artifacts defaultdict(<class 'list'>, {'model': [Artifact(artifact: uri: "pipelines/penguin-transform/Trainer/model/6"
custom_properties {
key: "name"
value {
string_value: "penguin-transform:2021-12-05T10:21:51.187624:Trainer:model:0"
}
}
custom_properties {
key: "tfx_version"
value {
string_value: "1.4.0"
}
}
, artifact_type: name: "Model"
)], 'model_run': [Artifact(artifact: uri: "pipelines/penguin-transform/Trainer/model_run/6"
custom_properties {
key: "name"
value {
string_value: "penguin-transform:2021-12-05T10:21:51.187624:Trainer:model_run:0"
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}
custom_properties {
key: "tfx_version"
value {
string_value: "1.4.0"
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}
, artifact_type: name: "ModelRun"
)]}) for execution 6
INFO:absl:MetadataStore with DB connection initialized
I1205 10:22:18.036643 24712 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:Component Trainer is finished.
I1205 10:22:18.041664 24712 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:Component Pusher is running.
INFO:absl:Running launcher for node_info {
type {
name: "tfx.components.pusher.component.Pusher"
}
id: "Pusher"
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contexts {
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contexts {
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inputs {
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context_queries {
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name {
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outputs {
outputs {
key: "pushed_model"
value {
artifact_spec {
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parameters {
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parameters {
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upstream_nodes: "Trainer"
execution_options {
caching_options {
}
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INFO:absl:MetadataStore with DB connection initialized
I1205 10:22:18.063011 24712 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Going to run a new execution 7
INFO:absl:Going to run a new execution: ExecutionInfo(execution_id=7, input_dict={'model': [Artifact(artifact: id: 12
type_id: 26
uri: "pipelines/penguin-transform/Trainer/model/6"
custom_properties {
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custom_properties {
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state: LIVE
create_time_since_epoch: 1638699738045
last_update_time_since_epoch: 1638699738045
, artifact_type: id: 26
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, artifact_type: name: "PushedModel"
)]}), exec_properties={'push_destination': '{\n "filesystem": {\n "base_directory": "serving_model/penguin-transform"\n }\n}', 'custom_config': 'null'}, execution_output_uri='pipelines/penguin-transform/Pusher/.system/executor_execution/7/executor_output.pb', stateful_working_dir='pipelines/penguin-transform/Pusher/.system/stateful_working_dir/2021-12-05T10:21:51.187624', tmp_dir='pipelines/penguin-transform/Pusher/.system/executor_execution/7/.temp/', pipeline_node=node_info {
type {
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id: "Pusher"
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contexts {
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contexts {
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value {
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}
}
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}
parameters {
parameters {
key: "custom_config"
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parameters {
key: "push_destination"
value {
field_value {
string_value: "{\n \"filesystem\": {\n \"base_directory\": \"serving_model/penguin-transform\"\n }\n}"
}
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upstream_nodes: "Trainer"
execution_options {
caching_options {
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}
, pipeline_info=id: "penguin-transform"
, pipeline_run_id='2021-12-05T10:21:51.187624')
WARNING:absl:Pusher is going to push the model without validation. Consider using Evaluator or InfraValidator in your pipeline.
INFO:absl:Model version: 1638699738
INFO:absl:Model written to serving path serving_model/penguin-transform/1638699738.
INFO:absl:Model pushed to pipelines/penguin-transform/Pusher/pushed_model/7.
INFO:absl:Cleaning up stateless execution info.
INFO:absl:Execution 7 succeeded.
INFO:absl:Cleaning up stateful execution info.
INFO:absl:Publishing output artifacts defaultdict(<class 'list'>, {'pushed_model': [Artifact(artifact: uri: "pipelines/penguin-transform/Pusher/pushed_model/7"
custom_properties {
key: "name"
value {
string_value: "penguin-transform:2021-12-05T10:21:51.187624:Pusher:pushed_model:0"
}
}
custom_properties {
key: "tfx_version"
value {
string_value: "1.4.0"
}
}
, artifact_type: name: "PushedModel"
)]}) for execution 7
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Component Pusher is finished.
I1205 10:22:18.092860 24712 rdbms_metadata_access_object.cc:686] No property is defined for the Type
Dovresti vedere "INFO:absl:Component Pusher è terminato." se la pipeline è stata completata correttamente.
Il componente pusher spinge il modello addestrato per la SERVING_MODEL_DIR che è il serving_model/penguin-transform directory se non hai modificato le variabili nelle fasi precedenti. Puoi vedere il risultato dal browser dei file nel pannello di sinistra in Colab, o usando il seguente comando:
# List files in created model directory.find {SERVING_MODEL_DIR}
serving_model/penguin-transform serving_model/penguin-transform/1638699738 serving_model/penguin-transform/1638699738/keras_metadata.pb serving_model/penguin-transform/1638699738/assets serving_model/penguin-transform/1638699738/variables serving_model/penguin-transform/1638699738/variables/variables.data-00000-of-00001 serving_model/penguin-transform/1638699738/variables/variables.index serving_model/penguin-transform/1638699738/saved_model.pb
È inoltre possibile controllare la firma del modello generato utilizzando il saved_model_cli strumento .
saved_model_cli show --dir {SERVING_MODEL_DIR}/$(ls -1 {SERVING_MODEL_DIR} | sort -nr | head -1) --tag_set serve --signature_def serving_default
The given SavedModel SignatureDef contains the following input(s):
inputs['examples'] tensor_info:
dtype: DT_STRING
shape: (-1)
name: serving_default_examples:0
The given SavedModel SignatureDef contains the following output(s):
outputs['output_0'] tensor_info:
dtype: DT_FLOAT
shape: (-1, 3)
name: StatefulPartitionedCall_2:0
Method name is: tensorflow/serving/predict
Perché abbiamo definito serving_default con la nostra serve_tf_examples_fn funzione, gli spettacoli di firma che ci vuole una singola stringa. Questa stringa è una stringa serializzata tf.Examples e verrà analizzato con il tf.io.parse_example () funzionano come abbiamo definito in precedenza (ulteriori informazioni su tf.Examples qui ).
Possiamo caricare il modello esportato e provare alcune inferenze con alcuni esempi.
# Find a model with the latest timestamp.
model_dirs = (item for item in os.scandir(SERVING_MODEL_DIR) if item.is_dir())
model_path = max(model_dirs, key=lambda i: int(i.name)).path
loaded_model = tf.keras.models.load_model(model_path)
inference_fn = loaded_model.signatures['serving_default']
WARNING:tensorflow:Inconsistent references when loading the checkpoint into this object graph. Either the Trackable object references in the Python program have changed in an incompatible way, or the checkpoint was generated in an incompatible program. Two checkpoint references resolved to different objects (<keras.saving.saved_model.load.TensorFlowTransform>TransformFeaturesLayer object at 0x7f5b0836e3d0> and <keras.engine.input_layer.InputLayer object at 0x7f5b091aa550>). WARNING:tensorflow:Inconsistent references when loading the checkpoint into this object graph. Either the Trackable object references in the Python program have changed in an incompatible way, or the checkpoint was generated in an incompatible program. Two checkpoint references resolved to different objects (<keras.saving.saved_model.load.TensorFlowTransform>TransformFeaturesLayer object at 0x7f5b0836e3d0> and <keras.engine.input_layer.InputLayer object at 0x7f5b091aa550>).
# Prepare an example and run inference.
features = {
'culmen_length_mm': tf.train.Feature(float_list=tf.train.FloatList(value=[49.9])),
'culmen_depth_mm': tf.train.Feature(float_list=tf.train.FloatList(value=[16.1])),
'flipper_length_mm': tf.train.Feature(int64_list=tf.train.Int64List(value=[213])),
'body_mass_g': tf.train.Feature(int64_list=tf.train.Int64List(value=[5400])),
}
example_proto = tf.train.Example(features=tf.train.Features(feature=features))
examples = example_proto.SerializeToString()
result = inference_fn(examples=tf.constant([examples]))
print(result['output_0'].numpy())
[[-2.5357873 -3.0600576 3.4993587]]
Il terzo elemento, che corrisponde alla specie 'Gentoo', dovrebbe essere il più grande tra i tre.
Prossimi passi
Se volete saperne di più su Transform componente, vedere Trasforma guida dei componenti . È possibile trovare ulteriori risorse su https://www.tensorflow.org/tfx/tutorials
Si prega di consultare Capire TFX Pipelines per conoscere meglio i vari concetti in TFX.