Ver no TensorFlow.org
Executar no Google Colab
Ver fonte no GitHub
Baixar cadernoNeste tutorial baseado em notebook, criaremos e executaremos um pipeline do TFX que cria um modelo de classificação simples e analisa seu desempenho em várias execuções. Este notebook é baseado no gasoduto TFX nós construímos em simples TFX Pipeline Tutorial . Se você ainda não leu esse tutorial, leia-o antes de continuar com este notebook.
Ao ajustar seu modelo ou treiná-lo com um novo conjunto de dados, você precisa verificar se seu modelo melhorou ou piorou. Apenas verificar métricas de nível superior, como precisão, pode não ser suficiente. Cada modelo treinado deve ser avaliado antes de ser enviado para produção.
Nós vamos adicionar um Evaluator componente para o gasoduto criado no tutorial anterior. O componente Evaluator realiza uma análise profunda para seus modelos e compara o novo modelo com uma linha de base para determinar se eles são "bons o suficiente". Ele é implementado utilizando o TensorFlow Modelo de Análise de biblioteca.
Consulte Compreender TFX Pipelines para aprender mais sobre vários conceitos em TFX.
Configurar
O processo de configuração é o mesmo do tutorial anterior.
Primeiro precisamos instalar o pacote TFX Python e baixar o conjunto de dados que usaremos para nosso modelo.
Atualizar Pip
Para evitar atualizar o Pip em um sistema ao executar localmente, verifique se estamos executando no Colab. É claro que os sistemas locais podem ser atualizados separadamente.
try:
import colab
!pip install --upgrade pip
except:
pass
Instalar TFX
pip install -U tfx
Você reiniciou o tempo de execução?
Se você estiver usando o Google Colab, na primeira vez que executar a célula acima, deverá reiniciar o runtime clicando no botão acima "RESTART RUNTIME" ou usando o menu "Runtime > Restart runtime...". Isso ocorre devido à maneira como o Colab carrega os pacotes.
Verifique as versões do TensorFlow e do TFX.
import tensorflow as tf
print('TensorFlow version: {}'.format(tf.__version__))
from tfx import v1 as tfx
print('TFX version: {}'.format(tfx.__version__))
TensorFlow version: 2.6.2 TFX version: 1.4.0
Configurar variáveis
Existem algumas variáveis usadas para definir um pipeline. Você pode personalizar essas variáveis como desejar. Por padrão, toda a saída do pipeline será gerada no diretório atual.
import os
PIPELINE_NAME = "penguin-tfma"
# Output directory to store artifacts generated from the pipeline.
PIPELINE_ROOT = os.path.join('pipelines', PIPELINE_NAME)
# Path to a SQLite DB file to use as an MLMD storage.
METADATA_PATH = os.path.join('metadata', PIPELINE_NAME, 'metadata.db')
# Output directory where created models from the pipeline will be exported.
SERVING_MODEL_DIR = os.path.join('serving_model', PIPELINE_NAME)
from absl import logging
logging.set_verbosity(logging.INFO) # Set default logging level.
Preparar dados de exemplo
Vamos usar o mesmo conjunto de dados Palmer Penguins .
Existem quatro características numéricas neste conjunto de dados que já foram normalizadas para ter intervalo [0,1]. Vamos construir um modelo de classificação que prevê as species de pingüins.
Como o TFX ExampleGen lê entradas de um diretório, precisamos criar um diretório e copiar o conjunto de dados para ele.
import urllib.request
import tempfile
DATA_ROOT = tempfile.mkdtemp(prefix='tfx-data') # Create a temporary directory.
_data_url = 'https://raw.githubusercontent.com/tensorflow/tfx/master/tfx/examples/penguin/data/labelled/penguins_processed.csv'
_data_filepath = os.path.join(DATA_ROOT, "data.csv")
urllib.request.urlretrieve(_data_url, _data_filepath)
('/tmp/tfx-datal5lxy_yw/data.csv', <http.client.HTTPMessage at 0x7fa18a9da150>)
Criar um pipeline
Nós vamos adicionar um Evaluator componente para o gasoduto que criamos no Simples TFX Pipeline Tutorial .
Um componente avaliador requer dados de entrada de um ExampleGen componente e um modelo a partir de um Trainer componente e um tfma.EvalConfig objeto. Opcionalmente, podemos fornecer um modelo de linha de base que pode ser usado para comparar métricas com o modelo recém-treinado.
Um avaliador cria dois tipos de artefatos de saída, ModelEvaluation e ModelBlessing . ModelEvaluation contém o resultado de avaliação detalhado que pode ser investigado e visualizado com a biblioteca TFMA. ModelBlessing contém um resultado booleano se o modelo passou por determinados critérios e pode ser usado em componentes posteriores como um Pusher como um sinal.
Escreva o código de treinamento do modelo
Nós vamos usar o mesmo código de modelo como no Simples TFX Pipeline Tutorial .
_trainer_module_file = 'penguin_trainer.py'
%%writefile {_trainer_module_file}
# Copied from https://www.tensorflow.org/tfx/tutorials/tfx/penguin_simple
from typing import List
from absl import logging
import tensorflow as tf
from tensorflow import keras
from tensorflow_transform.tf_metadata import schema_utils
from tfx.components.trainer.executor import TrainerFnArgs
from tfx.components.trainer.fn_args_utils import DataAccessor
from tfx_bsl.tfxio import dataset_options
from tensorflow_metadata.proto.v0 import schema_pb2
_FEATURE_KEYS = [
'culmen_length_mm', 'culmen_depth_mm', 'flipper_length_mm', 'body_mass_g'
]
_LABEL_KEY = 'species'
_TRAIN_BATCH_SIZE = 20
_EVAL_BATCH_SIZE = 10
# Since we're not generating or creating a schema, we will instead create
# a feature spec. Since there are a fairly small number of features this is
# manageable for this dataset.
_FEATURE_SPEC = {
**{
feature: tf.io.FixedLenFeature(shape=[1], dtype=tf.float32)
for feature in _FEATURE_KEYS
},
_LABEL_KEY: tf.io.FixedLenFeature(shape=[1], dtype=tf.int64)
}
def _input_fn(file_pattern: List[str],
data_accessor: DataAccessor,
schema: schema_pb2.Schema,
batch_size: int = 200) -> tf.data.Dataset:
"""Generates features and label for training.
Args:
file_pattern: List of paths or patterns of input tfrecord files.
data_accessor: DataAccessor for converting input to RecordBatch.
schema: schema of the input data.
batch_size: representing the number of consecutive elements of returned
dataset to combine in a single batch
Returns:
A dataset that contains (features, indices) tuple where features is a
dictionary of Tensors, and indices is a single Tensor of label indices.
"""
return data_accessor.tf_dataset_factory(
file_pattern,
dataset_options.TensorFlowDatasetOptions(
batch_size=batch_size, label_key=_LABEL_KEY),
schema=schema).repeat()
def _build_keras_model() -> tf.keras.Model:
"""Creates a DNN Keras model for classifying penguin data.
Returns:
A Keras Model.
"""
# The model below is built with Functional API, please refer to
# https://www.tensorflow.org/guide/keras/overview for all API options.
inputs = [keras.layers.Input(shape=(1,), name=f) for f in _FEATURE_KEYS]
d = keras.layers.concatenate(inputs)
for _ in range(2):
d = keras.layers.Dense(8, activation='relu')(d)
outputs = keras.layers.Dense(3)(d)
model = keras.Model(inputs=inputs, outputs=outputs)
model.compile(
optimizer=keras.optimizers.Adam(1e-2),
loss=tf.keras.losses.SparseCategoricalCrossentropy(from_logits=True),
metrics=[keras.metrics.SparseCategoricalAccuracy()])
model.summary(print_fn=logging.info)
return model
# TFX Trainer will call this function.
def run_fn(fn_args: TrainerFnArgs):
"""Train the model based on given args.
Args:
fn_args: Holds args used to train the model as name/value pairs.
"""
# This schema is usually either an output of SchemaGen or a manually-curated
# version provided by pipeline author. A schema can also derived from TFT
# graph if a Transform component is used. In the case when either is missing,
# `schema_from_feature_spec` could be used to generate schema from very simple
# feature_spec, but the schema returned would be very primitive.
schema = schema_utils.schema_from_feature_spec(_FEATURE_SPEC)
train_dataset = _input_fn(
fn_args.train_files,
fn_args.data_accessor,
schema,
batch_size=_TRAIN_BATCH_SIZE)
eval_dataset = _input_fn(
fn_args.eval_files,
fn_args.data_accessor,
schema,
batch_size=_EVAL_BATCH_SIZE)
model = _build_keras_model()
model.fit(
train_dataset,
steps_per_epoch=fn_args.train_steps,
validation_data=eval_dataset,
validation_steps=fn_args.eval_steps)
# The result of the training should be saved in `fn_args.serving_model_dir`
# directory.
model.save(fn_args.serving_model_dir, save_format='tf')
Writing penguin_trainer.py
Escreva uma definição de pipeline
Vamos definir uma função para criar um pipeline TFX. Além da componente avaliador mencionado acima, vamos adicionar mais um nó chamado Resolver . Para verificar se um novo modelo está ficando melhor do que o modelo anterior, precisamos compará-lo com um modelo publicado anteriormente, chamado baseline. ML Metadados (MLMD) rastreia todos os artefatos anteriores do gasoduto e Resolver pode encontrar o que foi o mais recente modelo abençoada - um modelo passou avaliador com sucesso - de MLMD usando uma classe estratégia chamada LatestBlessedModelStrategy .
import tensorflow_model_analysis as tfma
def _create_pipeline(pipeline_name: str, pipeline_root: str, data_root: str,
module_file: str, serving_model_dir: str,
metadata_path: str) -> tfx.dsl.Pipeline:
"""Creates a three component penguin pipeline with TFX."""
# Brings data into the pipeline.
example_gen = tfx.components.CsvExampleGen(input_base=data_root)
# Uses user-provided Python function that trains a model.
trainer = tfx.components.Trainer(
module_file=module_file,
examples=example_gen.outputs['examples'],
train_args=tfx.proto.TrainArgs(num_steps=100),
eval_args=tfx.proto.EvalArgs(num_steps=5))
# NEW: Get the latest blessed model for Evaluator.
model_resolver = tfx.dsl.Resolver(
strategy_class=tfx.dsl.experimental.LatestBlessedModelStrategy,
model=tfx.dsl.Channel(type=tfx.types.standard_artifacts.Model),
model_blessing=tfx.dsl.Channel(
type=tfx.types.standard_artifacts.ModelBlessing)).with_id(
'latest_blessed_model_resolver')
# NEW: Uses TFMA to compute evaluation statistics over features of a model and
# perform quality validation of a candidate model (compared to a baseline).
eval_config = tfma.EvalConfig(
model_specs=[tfma.ModelSpec(label_key='species')],
slicing_specs=[
# An empty slice spec means the overall slice, i.e. the whole dataset.
tfma.SlicingSpec(),
# Calculate metrics for each penguin species.
tfma.SlicingSpec(feature_keys=['species']),
],
metrics_specs=[
tfma.MetricsSpec(per_slice_thresholds={
'sparse_categorical_accuracy':
tfma.PerSliceMetricThresholds(thresholds=[
tfma.PerSliceMetricThreshold(
slicing_specs=[tfma.SlicingSpec()],
threshold=tfma.MetricThreshold(
value_threshold=tfma.GenericValueThreshold(
lower_bound={'value': 0.6}),
# Change threshold will be ignored if there is no
# baseline model resolved from MLMD (first run).
change_threshold=tfma.GenericChangeThreshold(
direction=tfma.MetricDirection.HIGHER_IS_BETTER,
absolute={'value': -1e-10}))
)]),
})],
)
evaluator = tfx.components.Evaluator(
examples=example_gen.outputs['examples'],
model=trainer.outputs['model'],
baseline_model=model_resolver.outputs['model'],
eval_config=eval_config)
# Checks whether the model passed the validation steps and pushes the model
# to a file destination if check passed.
pusher = tfx.components.Pusher(
model=trainer.outputs['model'],
model_blessing=evaluator.outputs['blessing'], # Pass an evaluation result.
push_destination=tfx.proto.PushDestination(
filesystem=tfx.proto.PushDestination.Filesystem(
base_directory=serving_model_dir)))
components = [
example_gen,
trainer,
# Following two components were added to the pipeline.
model_resolver,
evaluator,
pusher,
]
return tfx.dsl.Pipeline(
pipeline_name=pipeline_name,
pipeline_root=pipeline_root,
metadata_connection_config=tfx.orchestration.metadata
.sqlite_metadata_connection_config(metadata_path),
components=components)
Precisamos fornecer as seguintes informações para o avaliador via eval_config :
- Métricas adicionais para configurar (se desejar mais métricas do que as definidas no modelo).
- Fatias para configurar
- Modelos de limites de validação para verificar se a validação deve ser incluída
Porque SparseCategoricalAccuracy já foi incluído no model.compile() chamada, ele será incluído na análise automaticamente. Portanto, não adicionamos nenhuma métrica adicional aqui. SparseCategoricalAccuracy será usado para decidir se o modelo é bom o suficiente, também.
Calculamos as métricas para todo o conjunto de dados e para cada espécie de pinguim. SlicingSpec especifica como agregamos as métricas declarados.
Existem dois limites que um novo modelo deve passar, um é um limite absoluto de 0,6 e o outro é um limite relativo que deve ser maior que o modelo de linha de base. Quando você executar o pipeline, pela primeira vez, o change_threshold será ignorado e somente o value_threshold será verificada. Se você executar o pipeline mais de uma vez, o Resolver vai encontrar um modelo a partir da execução anterior e será usado como um modelo base para a comparação.
Veja guia componente avaliador para mais informações.
Executar o pipeline
Usaremos LocalDagRunner como no tutorial anterior.
tfx.orchestration.LocalDagRunner().run(
_create_pipeline(
pipeline_name=PIPELINE_NAME,
pipeline_root=PIPELINE_ROOT,
data_root=DATA_ROOT,
module_file=_trainer_module_file,
serving_model_dir=SERVING_MODEL_DIR,
metadata_path=METADATA_PATH))
INFO:absl:Generating ephemeral wheel package for '/tmpfs/src/temp/docs/tutorials/tfx/penguin_trainer.py' (including modules: ['penguin_trainer']).
INFO:absl:User module package has hash fingerprint version 1e19049dced0ccb21e0af60dae1c6e0ef09b63d1ff0e370d7f699920c2735703.
INFO:absl:Executing: ['/tmpfs/src/tf_docs_env/bin/python', '/tmp/tmpr3anh67s/_tfx_generated_setup.py', 'bdist_wheel', '--bdist-dir', '/tmp/tmp6s2sw4dj', '--dist-dir', '/tmp/tmp6jr76e54']
/tmpfs/src/tf_docs_env/lib/python3.7/site-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
setuptools.SetuptoolsDeprecationWarning,
listing git files failed - pretending there aren't any
INFO:absl:Successfully built user code wheel distribution at 'pipelines/penguin-tfma/_wheels/tfx_user_code_Trainer-0.0+1e19049dced0ccb21e0af60dae1c6e0ef09b63d1ff0e370d7f699920c2735703-py3-none-any.whl'; target user module is 'penguin_trainer'.
INFO:absl:Full user module path is 'penguin_trainer@pipelines/penguin-tfma/_wheels/tfx_user_code_Trainer-0.0+1e19049dced0ccb21e0af60dae1c6e0ef09b63d1ff0e370d7f699920c2735703-py3-none-any.whl'
INFO:absl:Using deployment config:
executor_specs {
key: "CsvExampleGen"
value {
beam_executable_spec {
python_executor_spec {
class_path: "tfx.components.example_gen.csv_example_gen.executor.Executor"
}
}
}
}
executor_specs {
key: "Evaluator"
value {
beam_executable_spec {
python_executor_spec {
class_path: "tfx.components.evaluator.executor.Executor"
}
}
}
}
executor_specs {
key: "Pusher"
value {
python_class_executable_spec {
class_path: "tfx.components.pusher.executor.Executor"
}
}
}
executor_specs {
key: "Trainer"
value {
python_class_executable_spec {
class_path: "tfx.components.trainer.executor.GenericExecutor"
}
}
}
custom_driver_specs {
key: "CsvExampleGen"
value {
python_class_executable_spec {
class_path: "tfx.components.example_gen.driver.FileBasedDriver"
}
}
}
metadata_connection_config {
sqlite {
filename_uri: "metadata/penguin-tfma/metadata.db"
connection_mode: READWRITE_OPENCREATE
}
}
INFO:absl:Using connection config:
sqlite {
filename_uri: "metadata/penguin-tfma/metadata.db"
connection_mode: READWRITE_OPENCREATE
}
INFO:absl:Component CsvExampleGen is running.
INFO:absl:Running launcher for node_info {
type {
name: "tfx.components.example_gen.csv_example_gen.component.CsvExampleGen"
}
id: "CsvExampleGen"
}
contexts {
contexts {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfma"
}
}
}
contexts {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T10:34:23.517028"
}
}
}
contexts {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfma.CsvExampleGen"
}
}
}
}
outputs {
outputs {
key: "examples"
value {
artifact_spec {
type {
name: "Examples"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
properties {
key: "version"
value: INT
}
}
}
}
}
}
parameters {
parameters {
key: "input_base"
value {
field_value {
string_value: "/tmp/tfx-datal5lxy_yw"
}
}
}
parameters {
key: "input_config"
value {
field_value {
string_value: "{\n \"splits\": [\n {\n \"name\": \"single_split\",\n \"pattern\": \"*\"\n }\n ]\n}"
}
}
}
parameters {
key: "output_config"
value {
field_value {
string_value: "{\n \"split_config\": {\n \"splits\": [\n {\n \"hash_buckets\": 2,\n \"name\": \"train\"\n },\n {\n \"hash_buckets\": 1,\n \"name\": \"eval\"\n }\n ]\n }\n}"
}
}
}
parameters {
key: "output_data_format"
value {
field_value {
int_value: 6
}
}
}
parameters {
key: "output_file_format"
value {
field_value {
int_value: 5
}
}
}
}
downstream_nodes: "Evaluator"
downstream_nodes: "Trainer"
execution_options {
caching_options {
}
}
INFO:absl:MetadataStore with DB connection initialized
running bdist_wheel
running build
running build_py
creating build
creating build/lib
copying penguin_trainer.py -> build/lib
installing to /tmp/tmp6s2sw4dj
running install
running install_lib
copying build/lib/penguin_trainer.py -> /tmp/tmp6s2sw4dj
running install_egg_info
running egg_info
creating tfx_user_code_Trainer.egg-info
writing tfx_user_code_Trainer.egg-info/PKG-INFO
writing dependency_links to tfx_user_code_Trainer.egg-info/dependency_links.txt
writing top-level names to tfx_user_code_Trainer.egg-info/top_level.txt
writing manifest file 'tfx_user_code_Trainer.egg-info/SOURCES.txt'
reading manifest file 'tfx_user_code_Trainer.egg-info/SOURCES.txt'
writing manifest file 'tfx_user_code_Trainer.egg-info/SOURCES.txt'
Copying tfx_user_code_Trainer.egg-info to /tmp/tmp6s2sw4dj/tfx_user_code_Trainer-0.0+1e19049dced0ccb21e0af60dae1c6e0ef09b63d1ff0e370d7f699920c2735703-py3.7.egg-info
running install_scripts
creating /tmp/tmp6s2sw4dj/tfx_user_code_Trainer-0.0+1e19049dced0ccb21e0af60dae1c6e0ef09b63d1ff0e370d7f699920c2735703.dist-info/WHEEL
creating '/tmp/tmp6jr76e54/tfx_user_code_Trainer-0.0+1e19049dced0ccb21e0af60dae1c6e0ef09b63d1ff0e370d7f699920c2735703-py3-none-any.whl' and adding '/tmp/tmp6s2sw4dj' to it
adding 'penguin_trainer.py'
adding 'tfx_user_code_Trainer-0.0+1e19049dced0ccb21e0af60dae1c6e0ef09b63d1ff0e370d7f699920c2735703.dist-info/METADATA'
adding 'tfx_user_code_Trainer-0.0+1e19049dced0ccb21e0af60dae1c6e0ef09b63d1ff0e370d7f699920c2735703.dist-info/WHEEL'
adding 'tfx_user_code_Trainer-0.0+1e19049dced0ccb21e0af60dae1c6e0ef09b63d1ff0e370d7f699920c2735703.dist-info/top_level.txt'
adding 'tfx_user_code_Trainer-0.0+1e19049dced0ccb21e0af60dae1c6e0ef09b63d1ff0e370d7f699920c2735703.dist-info/RECORD'
removing /tmp/tmp6s2sw4dj
WARNING: Logging before InitGoogleLogging() is written to STDERR
I1205 10:34:23.723806 28099 rdbms_metadata_access_object.cc:686] No property is defined for the Type
I1205 10:34:23.730262 28099 rdbms_metadata_access_object.cc:686] No property is defined for the Type
I1205 10:34:23.736788 28099 rdbms_metadata_access_object.cc:686] No property is defined for the Type
I1205 10:34:23.744907 28099 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:select span and version = (0, None)
INFO:absl:latest span and version = (0, None)
INFO:absl:MetadataStore with DB connection initialized
I1205 10:34:23.758380 28099 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:Going to run a new execution 1
INFO:absl:Going to run a new execution: ExecutionInfo(execution_id=1, input_dict={}, output_dict=defaultdict(<class 'list'>, {'examples': [Artifact(artifact: uri: "pipelines/penguin-tfma/CsvExampleGen/examples/1"
custom_properties {
key: "input_fingerprint"
value {
string_value: "split:single_split,num_files:1,total_bytes:25648,xor_checksum:1638700463,sum_checksum:1638700463"
}
}
custom_properties {
key: "name"
value {
string_value: "penguin-tfma:2021-12-05T10:34:23.517028:CsvExampleGen:examples:0"
}
}
custom_properties {
key: "span"
value {
int_value: 0
}
}
, artifact_type: name: "Examples"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
properties {
key: "version"
value: INT
}
)]}), exec_properties={'output_file_format': 5, 'output_config': '{\n "split_config": {\n "splits": [\n {\n "hash_buckets": 2,\n "name": "train"\n },\n {\n "hash_buckets": 1,\n "name": "eval"\n }\n ]\n }\n}', 'input_config': '{\n "splits": [\n {\n "name": "single_split",\n "pattern": "*"\n }\n ]\n}', 'output_data_format': 6, 'input_base': '/tmp/tfx-datal5lxy_yw', 'span': 0, 'version': None, 'input_fingerprint': 'split:single_split,num_files:1,total_bytes:25648,xor_checksum:1638700463,sum_checksum:1638700463'}, execution_output_uri='pipelines/penguin-tfma/CsvExampleGen/.system/executor_execution/1/executor_output.pb', stateful_working_dir='pipelines/penguin-tfma/CsvExampleGen/.system/stateful_working_dir/2021-12-05T10:34:23.517028', tmp_dir='pipelines/penguin-tfma/CsvExampleGen/.system/executor_execution/1/.temp/', pipeline_node=node_info {
type {
name: "tfx.components.example_gen.csv_example_gen.component.CsvExampleGen"
}
id: "CsvExampleGen"
}
contexts {
contexts {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfma"
}
}
}
contexts {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T10:34:23.517028"
}
}
}
contexts {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfma.CsvExampleGen"
}
}
}
}
outputs {
outputs {
key: "examples"
value {
artifact_spec {
type {
name: "Examples"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
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INFO:absl:Generating examples.
WARNING:apache_beam.runners.interactive.interactive_environment:Dependencies required for Interactive Beam PCollection visualization are not available, please use: `pip install apache-beam[interactive]` to install necessary dependencies to enable all data visualization features.
INFO:absl:Processing input csv data /tmp/tfx-datal5lxy_yw/* to TFExample.
WARNING:root:Make sure that locally built Python SDK docker image has Python 3.7 interpreter.
WARNING:apache_beam.io.tfrecordio:Couldn't find python-snappy so the implementation of _TFRecordUtil._masked_crc32c is not as fast as it could be.
INFO:absl:Examples generated.
INFO:absl:Cleaning up stateless execution info.
INFO:absl:Execution 1 succeeded.
INFO:absl:Cleaning up stateful execution info.
INFO:absl:Publishing output artifacts defaultdict(<class 'list'>, {'examples': [Artifact(artifact: uri: "pipelines/penguin-tfma/CsvExampleGen/examples/1"
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INFO:absl:MetadataStore with DB connection initialized
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INFO:absl:Train on the 'train' split when train_args.splits is not set.
INFO:absl:Evaluate on the 'eval' split when eval_args.splits is not set.
INFO:absl:udf_utils.get_fn {'train_args': '{\n "num_steps": 100\n}', 'custom_config': 'null', 'eval_args': '{\n "num_steps": 5\n}', 'module_path': 'penguin_trainer@pipelines/penguin-tfma/_wheels/tfx_user_code_Trainer-0.0+1e19049dced0ccb21e0af60dae1c6e0ef09b63d1ff0e370d7f699920c2735703-py3-none-any.whl'} 'run_fn'
INFO:absl:Installing 'pipelines/penguin-tfma/_wheels/tfx_user_code_Trainer-0.0+1e19049dced0ccb21e0af60dae1c6e0ef09b63d1ff0e370d7f699920c2735703-py3-none-any.whl' to a temporary directory.
INFO:absl:Executing: ['/tmpfs/src/tf_docs_env/bin/python', '-m', 'pip', 'install', '--target', '/tmp/tmpc97ini82', 'pipelines/penguin-tfma/_wheels/tfx_user_code_Trainer-0.0+1e19049dced0ccb21e0af60dae1c6e0ef09b63d1ff0e370d7f699920c2735703-py3-none-any.whl']
Processing ./pipelines/penguin-tfma/_wheels/tfx_user_code_Trainer-0.0+1e19049dced0ccb21e0af60dae1c6e0ef09b63d1ff0e370d7f699920c2735703-py3-none-any.whl
INFO:absl:Successfully installed 'pipelines/penguin-tfma/_wheels/tfx_user_code_Trainer-0.0+1e19049dced0ccb21e0af60dae1c6e0ef09b63d1ff0e370d7f699920c2735703-py3-none-any.whl'.
INFO:absl:Training model.
INFO:absl:Feature body_mass_g has a shape dim {
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. Setting to DenseTensor.
INFO:absl:Feature culmen_depth_mm has a shape dim {
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. Setting to DenseTensor.
INFO:absl:Feature culmen_length_mm has a shape dim {
size: 1
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. Setting to DenseTensor.
INFO:absl:Feature flipper_length_mm has a shape dim {
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. Setting to DenseTensor.
INFO:absl:Feature species has a shape dim {
size: 1
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. Setting to DenseTensor.
Installing collected packages: tfx-user-code-Trainer
Successfully installed tfx-user-code-Trainer-0.0+1e19049dced0ccb21e0af60dae1c6e0ef09b63d1ff0e370d7f699920c2735703
INFO:absl:Feature body_mass_g has a shape dim {
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INFO:absl:Feature culmen_depth_mm has a shape dim {
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. Setting to DenseTensor.
INFO:absl:Feature culmen_length_mm has a shape dim {
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. Setting to DenseTensor.
INFO:absl:Feature flipper_length_mm has a shape dim {
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. Setting to DenseTensor.
INFO:absl:Feature species has a shape dim {
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. Setting to DenseTensor.
INFO:absl:Feature body_mass_g has a shape dim {
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. Setting to DenseTensor.
INFO:absl:Feature culmen_depth_mm has a shape dim {
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. Setting to DenseTensor.
INFO:absl:Feature culmen_length_mm has a shape dim {
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. Setting to DenseTensor.
INFO:absl:Feature flipper_length_mm has a shape dim {
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. Setting to DenseTensor.
INFO:absl:Feature species has a shape dim {
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INFO:absl:Feature body_mass_g has a shape dim {
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. Setting to DenseTensor.
INFO:absl:Feature culmen_depth_mm has a shape dim {
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. Setting to DenseTensor.
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. Setting to DenseTensor.
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INFO:absl:Model: "model"
INFO:absl:__________________________________________________________________________________________________
INFO:absl:Layer (type) Output Shape Param # Connected to
INFO:absl:==================================================================================================
INFO:absl:culmen_length_mm (InputLayer) [(None, 1)] 0
INFO:absl:__________________________________________________________________________________________________
INFO:absl:culmen_depth_mm (InputLayer) [(None, 1)] 0
INFO:absl:__________________________________________________________________________________________________
INFO:absl:flipper_length_mm (InputLayer) [(None, 1)] 0
INFO:absl:__________________________________________________________________________________________________
INFO:absl:body_mass_g (InputLayer) [(None, 1)] 0
INFO:absl:__________________________________________________________________________________________________
INFO:absl:concatenate (Concatenate) (None, 4) 0 culmen_length_mm[0][0]
INFO:absl: culmen_depth_mm[0][0]
INFO:absl: flipper_length_mm[0][0]
INFO:absl: body_mass_g[0][0]
INFO:absl:__________________________________________________________________________________________________
INFO:absl:dense (Dense) (None, 8) 40 concatenate[0][0]
INFO:absl:__________________________________________________________________________________________________
INFO:absl:dense_1 (Dense) (None, 8) 72 dense[0][0]
INFO:absl:__________________________________________________________________________________________________
INFO:absl:dense_2 (Dense) (None, 3) 27 dense_1[0][0]
INFO:absl:==================================================================================================
INFO:absl:Total params: 139
INFO:absl:Trainable params: 139
INFO:absl:Non-trainable params: 0
INFO:absl:__________________________________________________________________________________________________
100/100 [==============================] - 1s 3ms/step - loss: 0.5273 - sparse_categorical_accuracy: 0.8175 - val_loss: 0.2412 - val_sparse_categorical_accuracy: 0.9600
2021-12-05 10:34:29.879208: W tensorflow/python/util/util.cc:348] Sets are not currently considered sequences, but this may change in the future, so consider avoiding using them.
INFO:tensorflow:Assets written to: pipelines/penguin-tfma/Trainer/model/3/Format-Serving/assets
INFO:tensorflow:Assets written to: pipelines/penguin-tfma/Trainer/model/3/Format-Serving/assets
INFO:absl:Training complete. Model written to pipelines/penguin-tfma/Trainer/model/3/Format-Serving. ModelRun written to pipelines/penguin-tfma/Trainer/model_run/3
INFO:absl:Cleaning up stateless execution info.
INFO:absl:Execution 3 succeeded.
INFO:absl:Cleaning up stateful execution info.
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INFO:absl:MetadataStore with DB connection initialized
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INFO:absl:MetadataStore with DB connection initialized
I1205 10:34:30.428037 28099 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Going to run a new execution 4
INFO:absl:Going to run a new execution: ExecutionInfo(execution_id=4, input_dict={'examples': [Artifact(artifact: id: 1
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, pipeline_info=id: "penguin-tfma"
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INFO:absl:udf_utils.get_fn {'example_splits': 'null', 'eval_config': '{\n "metrics_specs": [\n {\n "per_slice_thresholds": {\n "sparse_categorical_accuracy": {\n "thresholds": [\n {\n "slicing_specs": [\n {}\n ],\n "threshold": {\n "change_threshold": {\n "absolute": -1e-10,\n "direction": "HIGHER_IS_BETTER"\n },\n "value_threshold": {\n "lower_bound": 0.6\n }\n }\n }\n ]\n }\n }\n }\n ],\n "model_specs": [\n {\n "label_key": "species"\n }\n ],\n "slicing_specs": [\n {},\n {\n "feature_keys": [\n "species"\n ]\n }\n ]\n}', 'fairness_indicator_thresholds': 'null'} 'custom_eval_shared_model'
INFO:absl:Request was made to ignore the baseline ModelSpec and any change thresholds. This is likely because a baseline model was not provided: updated_config=
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INFO:absl:Using pipelines/penguin-tfma/Trainer/model/3/Format-Serving as model.
INFO:absl:The 'example_splits' parameter is not set, using 'eval' split.
INFO:absl:Evaluating model.
INFO:absl:udf_utils.get_fn {'example_splits': 'null', 'eval_config': '{\n "metrics_specs": [\n {\n "per_slice_thresholds": {\n "sparse_categorical_accuracy": {\n "thresholds": [\n {\n "slicing_specs": [\n {}\n ],\n "threshold": {\n "change_threshold": {\n "absolute": -1e-10,\n "direction": "HIGHER_IS_BETTER"\n },\n "value_threshold": {\n "lower_bound": 0.6\n }\n }\n }\n ]\n }\n }\n }\n ],\n "model_specs": [\n {\n "label_key": "species"\n }\n ],\n "slicing_specs": [\n {},\n {\n "feature_keys": [\n "species"\n ]\n }\n ]\n}', 'fairness_indicator_thresholds': 'null'} 'custom_extractors'
INFO:absl:Request was made to ignore the baseline ModelSpec and any change thresholds. This is likely because a baseline model was not provided: updated_config=
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INFO:absl:Request was made to ignore the baseline ModelSpec and any change thresholds. This is likely because a baseline model was not provided: updated_config=
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INFO:absl:Request was made to ignore the baseline ModelSpec and any change thresholds. This is likely because a baseline model was not provided: updated_config=
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WARNING:root:Make sure that locally built Python SDK docker image has Python 3.7 interpreter.
INFO:absl:Evaluation complete. Results written to pipelines/penguin-tfma/Evaluator/evaluation/4.
INFO:absl:Checking validation results.
WARNING:tensorflow:From /tmpfs/src/tf_docs_env/lib/python3.7/site-packages/tensorflow_model_analysis/writers/metrics_plots_and_validations_writer.py:114: tf_record_iterator (from tensorflow.python.lib.io.tf_record) is deprecated and will be removed in a future version.
Instructions for updating:
Use eager execution and:
`tf.data.TFRecordDataset(path)`
WARNING:tensorflow:From /tmpfs/src/tf_docs_env/lib/python3.7/site-packages/tensorflow_model_analysis/writers/metrics_plots_and_validations_writer.py:114: tf_record_iterator (from tensorflow.python.lib.io.tf_record) is deprecated and will be removed in a future version.
Instructions for updating:
Use eager execution and:
`tf.data.TFRecordDataset(path)`
INFO:absl:Blessing result True written to pipelines/penguin-tfma/Evaluator/blessing/4.
INFO:absl:Cleaning up stateless execution info.
INFO:absl:Execution 4 succeeded.
INFO:absl:Cleaning up stateful execution info.
INFO:absl:Publishing output artifacts defaultdict(<class 'list'>, {'blessing': [Artifact(artifact: uri: "pipelines/penguin-tfma/Evaluator/blessing/4"
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INFO:absl:MetadataStore with DB connection initialized
I1205 10:34:35.040588 28099 rdbms_metadata_access_object.cc:686] No property is defined for the Type
I1205 10:34:35.045548 28099 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:Component Evaluator is finished.
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INFO:absl:MetadataStore with DB connection initialized
I1205 10:34:35.068168 28099 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Going to run a new execution 5
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key: "model_blessing"
value {
channels {
producer_node_query {
id: "Evaluator"
}
context_queries {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfma"
}
}
}
context_queries {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T10:34:23.517028"
}
}
}
context_queries {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfma.Evaluator"
}
}
}
artifact_query {
type {
name: "ModelBlessing"
}
}
output_key: "blessing"
}
}
}
}
outputs {
outputs {
key: "pushed_model"
value {
artifact_spec {
type {
name: "PushedModel"
}
}
}
}
}
parameters {
parameters {
key: "custom_config"
value {
field_value {
string_value: "null"
}
}
}
parameters {
key: "push_destination"
value {
field_value {
string_value: "{\n \"filesystem\": {\n \"base_directory\": \"serving_model/penguin-tfma\"\n }\n}"
}
}
}
}
upstream_nodes: "Evaluator"
upstream_nodes: "Trainer"
execution_options {
caching_options {
}
}
, pipeline_info=id: "penguin-tfma"
, pipeline_run_id='2021-12-05T10:34:23.517028')
INFO:absl:Model version: 1638700475
INFO:absl:Model written to serving path serving_model/penguin-tfma/1638700475.
INFO:absl:Model pushed to pipelines/penguin-tfma/Pusher/pushed_model/5.
INFO:absl:Cleaning up stateless execution info.
INFO:absl:Execution 5 succeeded.
INFO:absl:Cleaning up stateful execution info.
INFO:absl:Publishing output artifacts defaultdict(<class 'list'>, {'pushed_model': [Artifact(artifact: uri: "pipelines/penguin-tfma/Pusher/pushed_model/5"
custom_properties {
key: "name"
value {
string_value: "penguin-tfma:2021-12-05T10:34:23.517028:Pusher:pushed_model:0"
}
}
custom_properties {
key: "tfx_version"
value {
string_value: "1.4.0"
}
}
, artifact_type: name: "PushedModel"
)]}) for execution 5
INFO:absl:MetadataStore with DB connection initialized
I1205 10:34:35.098553 28099 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:Component Pusher is finished.
Quando o pipeline for concluído, você poderá ver algo como o seguinte:
INFO:absl:Blessing result True written to pipelines/penguin-tfma/Evaluator/blessing/4.
Ou você também pode verificar manualmente o diretório de saída onde os artefatos gerados estão armazenados. Se você visitar pipelines/penguin-tfma/Evaluator/blessing/ com um broswer arquivo, você pode ver um arquivo com um nome BLESSED ou NOT_BLESSED de acordo com o resultado da avaliação.
Se o resultado bênção é False , Pusher irá recusar-se a empurrar o modelo à serving_model_dir , porque o modelo não é bom o suficiente para ser usado na produção.
Você pode executar o pipeline novamente possivelmente com diferentes configurações de avaliação. Mesmo se você executar o gasoduto com exatamente a mesma configuração e conjunto de dados, o modelo treinado pode ser ligeiramente diferente devido à aleatoriedade inerente do treinamento do modelo que pode levar a uma NOT_BLESSED modelo.
Examinar as saídas do pipeline
Você pode usar o TFMA para investigar e visualizar o resultado da avaliação no artefato ModelEvaluation.
Obtenha o resultado da análise dos artefatos de saída
Você pode usar APIs MLMD para localizar essas saídas programaticamente. Primeiro, definiremos algumas funções utilitárias para procurar os artefatos de saída que acabaram de ser produzidos.
from ml_metadata.proto import metadata_store_pb2
# Non-public APIs, just for showcase.
from tfx.orchestration.portable.mlmd import execution_lib
# TODO(b/171447278): Move these functions into the TFX library.
def get_latest_artifacts(metadata, pipeline_name, component_id):
"""Output artifacts of the latest run of the component."""
context = metadata.store.get_context_by_type_and_name(
'node', f'{pipeline_name}.{component_id}')
executions = metadata.store.get_executions_by_context(context.id)
latest_execution = max(executions,
key=lambda e:e.last_update_time_since_epoch)
return execution_lib.get_artifacts_dict(metadata, latest_execution.id,
[metadata_store_pb2.Event.OUTPUT])
Podemos encontrar a última execução do Evaluator componente e obter artefatos do mesmo de saída.
# Non-public APIs, just for showcase.
from tfx.orchestration.metadata import Metadata
from tfx.types import standard_component_specs
metadata_connection_config = tfx.orchestration.metadata.sqlite_metadata_connection_config(
METADATA_PATH)
with Metadata(metadata_connection_config) as metadata_handler:
# Find output artifacts from MLMD.
evaluator_output = get_latest_artifacts(metadata_handler, PIPELINE_NAME,
'Evaluator')
eval_artifact = evaluator_output[standard_component_specs.EVALUATION_KEY][0]
INFO:absl:MetadataStore with DB connection initialized
Evaluator sempre retorna um artefato avaliação, e podemos visualizá-lo usando a biblioteca TensorFlow Modelo de Análise. Por exemplo, o código a seguir renderizará as métricas de precisão para cada espécie de pinguim.
import tensorflow_model_analysis as tfma
eval_result = tfma.load_eval_result(eval_artifact.uri)
tfma.view.render_slicing_metrics(eval_result, slicing_column='species')
SlicingMetricsViewer(config={'weightedExamplesColumn': 'example_count'}, data=[{'slice': 'species:0', 'metrics…
Se você escolher 'sparse_categorical_accuracy' em Show lista drop-down, você pode ver os valores de precisão por espécie. Você pode querer adicionar mais fatias e verificar se o seu modelo é bom para todas as distribuições e se existe algum viés possível.
Próximos passos
Saiba mais sobre a análise modelo em TensorFlow Modelo de Análise de biblioteca tutorial .
Você pode encontrar mais recursos sobre https://www.tensorflow.org/tfx/tutorials
Consulte Compreender TFX Pipelines para aprender mais sobre vários conceitos em TFX.